RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RUVBL1Q9Y265 456 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PCDHA2Q9Y5H9 948 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RALGAPA1Q6GYQ0 2036 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MGAQ8IWI9 3026 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TANC1Q9C0D5 1861 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LAMA1P25391 3075 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 NLRC5Q86WI3 1866 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 DENND3A2RUS2 1198 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 A8MV72 311 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 KPNA7A9QM74 516 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 EIF3CLB5ME19 914 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TULP2O00295 520 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ARNTLO00327 626 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 DVL2O14641 736 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 RASGRF2O14827 1237 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ZSCAN9O15535 394 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 STRNO43815 780 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 FUCA1P04066 466 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CSF2P04141 144 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 RPLP2P05387 115 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ABCB1P08183 1280 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 SUPT20HL2P0C7V6 817 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 UBL4AP11441 157 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ATP5JP18859 108 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CD72P21854 359 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TACR1P25103 407 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CHMLP26374 656 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 BSGP35613 385 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 NUP62P37198 522 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 WASP42768 502 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 OR1G1P47890 313 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 SUMO3P55854 103 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ARPC4P59998 168 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 B2MP61769 119 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 RPP30P78346 268 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TAP2Q03519 686 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBB2AQ13885 445 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CRYMQ14894 314 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 KIR3DS1Q14943 382 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 IQCB1Q15051 598 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 WDR43Q15061 677 aaKnown RBP eCLIP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TBCCQ15814 346 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 UGT8Q16880 541 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 LETM2Q2VYF4 491 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 KCTD21Q4G0X4 260 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ARHGAP17Q68EM7 881 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 MIS18BP1Q6P0N0 1132 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ZCCHC12Q6PEW1 402 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 USP17L6PQ6QN14 398 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 MPZL3Q6UWV2 235 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CEP57Q86XR8 500 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM114A1Q8IWE2 563 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 SIRT2Q8IXJ6 389 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 PHC2Q8IXK0 858 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ADGRF2Q8IZF7 708 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 SIX6OS1Q8N1H7 587 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 RNF10Q8N5U6 811 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 NETO2Q8NC67 525 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 PRPF31Q8WWY3 499 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 EFHD2Q96C19 240 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 APOPT1Q96IL0 206 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TPD52L3Q96J77 140 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 IFT74Q96LB3 600 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 PRICKLE1Q96MT3 831 aaPredicted RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 USP28Q96RU2 1077 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 LMF1Q96S06 567 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 AGAP2Q99490 1192 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 EIF3CQ99613 913 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 PRPF18Q99633 342 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 FUZQ9BT04 418 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 MYL10Q9BUA6 226 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBB6Q9BUF5 446 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBB2BQ9BVA1 445 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 NUP85Q9BW27 656 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 MAGEB5Q9BZ81 275 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 KCNK12Q9HB15 430 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 PRDM8Q9NQV8 689 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 SDHAF3Q9NRP4 125 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CENPMQ9NSP4 180 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 LMBRD1Q9NUN5 540 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM53CQ9NYF3 392 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CYP39A1Q9NYL5 469 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 BAIAP2L1Q9UHR4 511 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 ATP6V1HQ9UI12 483 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TUBE1Q9UJT0 475 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 NUDT5Q9UKK9 219 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 FBXO4Q9UKT5 387 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 TMPRSS11EQ9UL52 423 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 PCDHGA5Q9Y5G8 931 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 SPTBN1Q01082 2364 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 CENPEQ02224 2701 aa3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 FN1P02751 2386 aaKnown RBP3.55□□□□□ -1.84
ECHDC1-205ENST00000368295 A0A1B0GWJ7 208 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 ARHGEF37A1IGU5 675 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 OR14I1A6ND48 311 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 SHISA7A6NL88 538 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 C22orf46C9J442 243 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 E9PI62 339 aa3.54□□□□□ -1.84
ECHDC1-205ENST00000368295 TRDMT1O14717 391 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms