RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ATP5F1P24539 256 aaPredicted RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 DPP6P42658 865 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 COG7P83436 770 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 IRF9Q00978 393 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 GALNT2Q10471 571 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 ZBTB17Q13105 803 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 LRP8Q14114 963 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 OTUD1Q5VV17 481 aaPredicted RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 TPGS2Q68CL5 300 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 PRMT9Q6P2P2 845 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 GALNT7Q86SF2 657 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 AQP12AQ8IXF9 295 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 DEFB106AQ8N104 65 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 TRIML2Q8N7C3 387 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 ZBTB44Q8NCP5 570 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 GABPB2Q8TAK5 448 aaPredicted RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 EME1Q96AY2 570 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 ROPN1LQ96C74 230 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 TCEAL4Q96EI5 215 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 RMND5BQ96G75 393 aaPredicted RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 TNIP3Q96KP6 325 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 SUSD3Q96L08 255 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 MRPL57Q9BQC6 102 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 TRMOQ9BU70 441 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 SLC25A23Q9BV35 468 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 B3GNT5Q9BYG0 378 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 YTHDF1Q9BYJ9 559 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 TRIM15Q9C019 465 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 TASP1Q9H6P5 420 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 MEAF6Q9HAF1 191 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 EML4Q9HC35 981 aaKnown RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 TRPC7Q9HCX4 862 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 FAIMQ9NVQ4 179 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 SPATA6Q9NWH7 488 aaPredicted RBP11.52□□□□□ -0.57
USF1-201ENST00000368019 DLL3Q9NYJ7 618 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 CD300AQ9UGN4 299 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 ZDHHC2Q9UIJ5 367 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 ACOT9Q9Y305 439 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 SCN1AP35498 2009 aa11.52□□□□□ -0.57
USF1-201ENST00000368019 ZNF638Q14966 1978 aaKnown RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 H7C4K7 107 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 PRRG1O14668 218 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 SPTLC1O15269 473 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 LAMTOR5O43504 91 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 DLX3O60479 287 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 PFDN1O60925 122 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 MOSPD3O75425 235 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 LRG1P02750 347 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 SLC35E2BP0CK96 405 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 EPHA3P29320 983 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 CCR2P41597 374 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 EPHA5P54756 1037 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 RAB10P61026 200 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 ESRRGP62508 458 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 PEX6Q13608 980 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 GRM3Q14832 879 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 FAM78AQ5JUQ0 283 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 PCID2Q5JVF3 399 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 C6orf52Q5T4I8 152 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 IYDQ6PHW0 289 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 KIAA0408Q6ZU52 694 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 ZNF354CQ86Y25 554 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 EFCAB3Q8N7B9 438 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 DNASE1L2Q92874 299 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.51□□□□□ -0.57
USF1-201ENST00000368019 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 SGF29Q96ES7 293 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 ASB16Q96NS5 453 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 TCF12Q99081 682 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 MLPHQ9BV36 600 aaPredicted RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 WDR55Q9H6Y2 383 aaPredicted RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 CLK4Q9HAZ1 481 aaKnown RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 SPAG4Q9NPE6 437 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 PRMT8Q9NR22 394 aaPredicted RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 HEBP1Q9NRV9 189 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 C20orf96Q9NUD7 363 aaPredicted RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 FAM49BQ9NUQ9 324 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 MAFFQ9ULX9 164 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 ZNF510Q9Y2H8 683 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 MFHAS1Q9Y4C4 1052 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 PCDHGA2Q9Y5H1 932 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 INSL5Q9Y5Q6 135 aa11.51□□□□□ -0.57
USF1-201ENST00000368019 TPRP12270 2363 aaKnown RBP11.51□□□□□ -0.57
USF1-201ENST00000368019 RALGAPA1Q6GYQ0 2036 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 MED19A0JLT2 244 aaPredicted RBP11.5□□□□□ -0.57
USF1-201ENST00000368019 SH3PXD2BA1X283 911 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 C7orf72A4D263 438 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 TRIM64BA6NI03 449 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 PIRO00625 290 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 ZNF197O14709 1029 aa11.5□□□□□ -0.57
USF1-201ENST00000368019 ZSCAN9O15535 394 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms