RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 FIBCD1Q8N539 461 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 ROPN1LQ96C74 230 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 LRRC58Q96CX6 371 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 L3HYPDHQ96EM0 354 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 KCTD14Q9BQ13 255 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-202ENST00000367279 TUBB1Q9H4B7 451 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 ARNT2Q9HBZ2 717 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 OLAHQ9NV23 265 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 CNOT11Q9UKZ1 510 aaKnown RBP12.29□□□□□ -0.44
PTPN7-202ENST00000367279 USP22Q9UPT9 525 aa12.29□□□□□ -0.44
PTPN7-202ENST00000367279 ARPC2O15144 300 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 RPP40O75818 363 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ATXN1LP0C7T5 689 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ZNF23P17027 643 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 TXNL4AP83876 142 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 PLCL1Q15111 1095 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ANKS6Q68DC2 871 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 MSANTD2Q6P1R3 559 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CAMK1DQ8IU85 385 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 KLHDC9Q8NEP7 349 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ARRDC2Q8TBH0 407 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 MIPOL1Q8TD10 442 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SNRNP27Q8WVK2 155 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 FAM193BQ96PV7 902 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 PKMYT1Q99640 499 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 GPR21Q99679 349 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 BRCA2P51587 3418 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ANKRD33BA6NCL7 494 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 MROH6A6NGR9 719 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CLOCKO15516 846 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SNX2O60749 519 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CYP11A1P05108 521 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SERPINF2P08697 491 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 FDXRP22570 491 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 EEF1B2P24534 225 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 HTR7P34969 479 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 YAP1P46937 504 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CDKN1CP49918 316 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 RAD51Q06609 339 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ZIK1Q3SY52 487 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 OR7D4Q8NG98 312 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SUSD3Q96L08 255 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ADI1Q9BV57 179 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CD274Q9NZQ7 290 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SUN2Q9UH99 717 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 A0A0D9SEW6 157 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 M0QZQ0 153 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 EI24O14681 340 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 B4GALT3O60512 393 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CHEK2O96017 543 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CDK4P11802 303 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 ACADVLP49748 655 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 UFM1P61960 85 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 HPCAP84074 193 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 TAF10Q12962 218 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 EIF4EBP2Q13542 120 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 PTPRNQ16849 979 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 AFMIDQ63HM1 303 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CHST15Q7LFX5 561 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 RALGPS2Q86X27 583 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CMTR2Q8IYT2 770 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 DCP1BQ8IZD4 617 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 CDYL2Q8N8U2 506 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 STAG3L4Q8TBR4 150 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 GIPC2Q8TF65 315 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 HOPXQ9BPY8 73 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 HGH1Q9BTY7 390 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 POLR3BQ9NW08 1133 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 TMEM248Q9NWD8 314 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
PTPN7-202ENST00000367279 TAS2R13Q9NYV9 303 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SLAMF8Q9P0V8 285 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 SARDHQ9UL12 918 aa12.28□□□□□ -0.44
PTPN7-202ENST00000367279 A0A0U1RQF3 1178 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 IQCA1LA6NCM1 817 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 CCDC154A6NI56 674 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 SCAMP3O14828 347 aaKnown RBP12.27□□□□□ -0.45
PTPN7-202ENST00000367279 ECI2O75521 394 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 PAPSS2O95340 614 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-202ENST00000367279 SLC6A2P23975 617 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 LIPEQ05469 1076 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 PLA2G4EQ3MJ16 856 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 CTXN3Q4LDR2 81 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 ZRANB3Q5FWF4 1079 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 GLT6D1Q7Z4J2 308 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 TEX37Q96LM6 180 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 RNF145Q96MT1 663 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 ALG2Q9H553 416 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-202ENST00000367279 BBIP1A8MTZ0 92 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 PCNAP12004 261 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 MTHFD2P13995 350 aa12.27□□□□□ -0.45
PTPN7-202ENST00000367279 ADARP55265 1226 aaKnown RBP12.27□□□□□ -0.45
PTPN7-202ENST00000367279 PTPRRQ15256 657 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms