RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PDZD7Q9H5P4 517 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 C20orf141Q9NUB4 165 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 POLG2Q9UHN1 485 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 RIPOR2Q9Y4F9 1068 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 RNF215Q9Y6U7 377 aa2.22□□□□□ -2.05
RNU4-42P-201ENST00000364738 PTPRCP08575 1304 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 hCG_1642624A0A1W2PR95 340 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 NDUFAF8A1L188 74 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 KRTAP16-1A8MUX0 517 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 HMGB1P1B2RPK0 211 aaPredicted RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 NR5A2O00482 541 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 PSMD14O00487 310 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 EGFP01133 1207 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 TFP02787 698 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 FAM106CPP0CH98 169 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 ERVK-10P10266 1014 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 IRF1P10914 325 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 GNB3P16520 340 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 HOXA13P31271 388 aaPredicted RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 GPD2P43304 727 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 DSCR10P59022 87 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 TAS2R38P59533 333 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 RPL24P83731 157 aaKnown RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 FOXM1Q08050 763 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 TDGQ13569 410 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 SLC12A1Q13621 1099 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 RNPS1Q15287 305 aaKnown RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZFP69Q49AA0 526 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 FRG2Q64ET8 278 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZNF790Q6PG37 636 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 BRAT1Q6PJG6 821 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 SLC46A3Q7Z3Q1 461 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 TRPT1Q86TN4 253 aaKnown RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 CCDC146Q8IYE0 955 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 EXOC8Q8IYI6 725 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 HMGCLL1Q8TB92 370 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 TMEM190Q8WZ59 177 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 SECISBP2LQ93073 1101 aaKnown RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZNF622Q969S3 477 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 ORAI1Q96D31 301 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 MPHOSPH8Q99549 860 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 REEP2Q9BRK0 252 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 PHF7Q9BWX1 381 aaPredicted RBP2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 HEMGNQ9BXL5 484 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 WDR13Q9H1Z4 485 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 PLEKHA4Q9H4M7 779 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 HSPB7Q9UBY9 170 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 TAGLN3Q9UI15 199 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 ACSL5Q9ULC5 683 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 C2CD2Q9Y426 696 aa2.21□□□□□ -2.06
RNU4-42P-201ENST00000364738 CACNA1FO60840 1977 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 CTAGE9A4FU28 777 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 PLEKHD1A6NEE1 506 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 TEX22C9J3V5 150 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 EIF3DO15371 548 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 CTSVO60911 334 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 FTCDO95954 541 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 CTAGE8P0CG41 777 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 SP100P23497 879 aaPredicted RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 HOXC8P31273 242 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 AHRP35869 848 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 PLIN5Q00G26 463 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 NAE1Q13564 534 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 TECRLQ5HYJ1 363 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 TXNDC8Q6A555 127 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZNF280DQ6N043 979 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 FAM53AQ6NSI3 398 aaPredicted RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 SLC22A25Q6T423 547 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 RBMS3Q6XE24 437 aaKnown RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZNF704Q6ZNC4 412 aaPredicted RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 QSOX2Q6ZRP7 698 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 RRM2BQ7LG56 351 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 GPR180Q86V85 440 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 SUGP1Q8IWZ8 645 aaKnown RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 CTAGE4Q8IX94 777 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 ACVR1CQ8NER5 493 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 OR5R1Q8NH85 324 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 FCAMRQ8WWV6 532 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 TAAR8Q969N4 342 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZNF653Q96CK0 615 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 TRIM44Q96DX7 344 aaPredicted RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 GRAMD2BQ96HH9 432 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 OPRPNQ99935 248 aaPredicted RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 FAM110AQ9BQ89 295 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 EIF2AK1Q9BQI3 630 aaKnown RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 IFIH1Q9BYX4 1025 aaKnown RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 TKTL2Q9H0I9 626 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 BICC1Q9H694 974 aaKnown RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 ERVMER34-1Q9H9K5 563 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 INTS10Q9NVR2 710 aaKnown RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 PAK5Q9P286 719 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 MARCH4Q9P2E8 410 aaPredicted RBP2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 PADI3Q9ULW8 664 aa2.2□□□□□ -2.06
RNU4-42P-201ENST00000364738 IGKV6D-41A0A0C4DH26 115 aa2.19□□□□□ -2.06
RNU4-42P-201ENST00000364738 TEX13CA0A0J9YWL9 993 aa2.19□□□□□ -2.06
RNU4-42P-201ENST00000364738 A0A0J9YWU9 116 aa2.19□□□□□ -2.06
RNU4-42P-201ENST00000364738 GOLGA6L10A0A0M3HER8 536 aa2.19□□□□□ -2.06
RNU4-42P-201ENST00000364738 ZCWPW2A0A1B0GU75 182 aa2.19□□□□□ -2.06
RNU4-42P-201ENST00000364738 CLIC2O15247 247 aa2.19□□□□□ -2.06
RNU4-42P-201ENST00000364738 SPINT2O43291 252 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms