RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 APOLD1Q96LR9 279 aa18.52■□□□□ 0.56
CLIP2-202ENST00000361545 GPD2P43304 727 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 FASTKD3Q14CZ7 662 aaKnown RBP18.52■□□□□ 0.55
CLIP2-202ENST00000361545 NRF1Q16656 503 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.52■□□□□ 0.55
CLIP2-202ENST00000361545 SIX5Q8N196 739 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 DHRSXQ8N5I4 330 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 PCDH19Q8TAB3 1148 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 SUSD3Q96L08 255 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 TEKT5Q96M29 485 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 GMLQ99445 158 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 DNAJC11Q9NVH1 559 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 ZNF490Q9ULM2 529 aaPredicted RBP18.52■□□□□ 0.55
CLIP2-202ENST00000361545 CCNDBP1O95273 360 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.52■□□□□ 0.55
CLIP2-202ENST00000361545 TAF13Q15543 124 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 SERPINA9Q86WD7 417 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 IFNLR1Q8IU57 520 aaPredicted RBP18.52■□□□□ 0.55
CLIP2-202ENST00000361545 EPS8L2Q9H6S3 715 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 CCSER2Q9H7U1 834 aa18.52■□□□□ 0.55
CLIP2-202ENST00000361545 RGSL1A5PLK6 1076 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MANFP55145 182 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 NRG1Q02297 640 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 HNRNPDQ14103 355 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SETD9Q8NE22 299 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MMADHCQ9H3L0 296 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MAT2BQ9NZL9 334 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 GOT2P00505 430 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 GDI1P31150 447 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 CTU1Q7Z7A3 348 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 GRIP2Q9C0E4 1043 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 POLMQ9NP87 494 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SPAG4Q9NPE6 437 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 FAM25AB3EWG3 89 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 FAM25CB3EWG5 89 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 FAM25GB3EWG6 89 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MAP2K7O14733 419 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 NMBRP28336 390 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MTAPQ13126 283 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 NEDD8Q15843 81 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 TIGD2Q4W5G0 525 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 ALYREFQ86V81 257 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 HID1Q8IV36 788 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SLC44A1Q8WWI5 657 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 PALMDQ9NP74 551 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 INTS7Q9NVH2 962 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SERPINB1P30740 379 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 BUD31P41223 144 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 CSNK2BP67870 215 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SLC20A2Q08357 652 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SPIRE1Q08AE8 756 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 HDDC3Q8N4P3 179 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 ST13P5Q8NFI4 369 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 OR4A15Q8NGL6 344 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MAGEE2Q8TD90 523 aaPredicted RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 RCN3Q96D15 328 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 LMLNQ96KR4 655 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 SPATA5L1Q9BVQ7 753 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 TRIT1Q9H3H1 467 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 CREBZFQ9NS37 354 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 GEMIN8Q9NWZ8 242 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 ASB3Q9Y575 518 aa18.51■□□□□ 0.55
CLIP2-202ENST00000361545 COPG1Q9Y678 874 aaKnown RBP18.51■□□□□ 0.55
CLIP2-202ENST00000361545 MYL12BO14950 172 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 RPIAP49247 311 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 PTCD2Q8WV60 388 aaKnown RBP18.5■□□□□ 0.55
CLIP2-202ENST00000361545 RMND5BQ96G75 393 aaPredicted RBP18.5■□□□□ 0.55
CLIP2-202ENST00000361545 EQTNQ9NQ60 294 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 OSER1Q9NX31 292 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 COLEC10Q9Y6Z7 277 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 KNDC1Q76NI1 1749 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 STK16O75716 305 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 DLGAP3O95886 979 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 F2P00734 622 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 FSHRP23945 695 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 MPSTP25325 297 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 ADRM1Q16186 407 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 SLC35G1Q2M3R5 365 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 ADGRG2Q8IZP9 1017 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 CDH19Q9H159 772 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 SIX2Q9NPC8 291 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 RPS6KA6Q9UK32 745 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 SORCS3Q9UPU3 1222 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 IRAK2O43187 625 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 TIE1P35590 1138 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 LSM12Q3MHD2 195 aaKnown RBP18.5■□□□□ 0.55
CLIP2-202ENST00000361545 TTC27Q6P3X3 843 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 TIMM22Q9Y584 194 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 PRKCGP05129 697 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 TMEM220Q6QAJ8 160 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 ARMC8Q8IUR7 673 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 TWNKQ96RR1 684 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 CYP2S1Q96SQ9 504 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 POLR1BQ9H9Y6 1135 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 TLR6Q9Y2C9 796 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 COQ4Q9Y3A0 265 aa18.5■□□□□ 0.55
CLIP2-202ENST00000361545 COL1A1P02452 1464 aaPredicted RBP18.5■□□□□ 0.55
CLIP2-202ENST00000361545 IDO1P14902 403 aa18.49■□□□□ 0.55
CLIP2-202ENST00000361545 CDH3P22223 829 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms