RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 XPAP23025 273 aaPredicted RBP20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 CDKN1CP49918 316 aaPredicted RBP20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 ENPP2Q13822 863 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 ARHGEF7Q14155 803 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 DBN1Q16643 649 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 ZNF549Q6P9A3 640 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 CACNA2D3Q8IZS8 1091 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 PLD6Q8N2A8 252 aaKnown RBP20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 PLCD3Q8N3E9 789 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 LRRC8CQ8TDW0 803 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 PBXIP1Q96AQ6 731 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 TSNARE1Q96NA8 513 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 FAM129BQ96TA1 746 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 OLFM1Q99784 485 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 C1QTNF1Q9BXJ1 281 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 FBRSL1Q9HCM7 1045 aaKnown RBP20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 PCDH12Q9NPG4 1184 aa20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 FNDC3AQ9Y2H6 1198 aaKnown RBP20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 TCF20Q9UGU0 1960 aaKnown RBP20.89■□□□□ 0.94
MAP1LC3A-201ENST00000360668 GLYATL1P3A0A0U1RQE8 302 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 BIRC5O15392 142 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PRAMEF1O95521 474 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CHRM1P11229 460 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ITGALP20701 1170 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ITGB7P26010 798 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PPARGP37231 505 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 IRF9Q00978 393 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 FAM151BQ6UXP7 276 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 DPPA4Q7L190 304 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SNX20Q7Z614 316 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 DSG4Q86SJ6 1040 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TTC7BQ86TV6 843 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PIP4K2CQ8TBX8 421 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 AARSD1Q9BTE6 412 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 FAM96AQ9H5X1 160 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SARDHQ9UL12 918 aa20.89■□□□□ 0.93
MAP1LC3A-201ENST00000360668 KPNA3O00505 521 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PROCP04070 461 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 C1SP09871 688 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 FDXRP22570 491 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PTGER3P43115 390 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ADARP55265 1226 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SEMG2Q02383 582 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 NFATC2Q13469 925 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ITIH4Q14624 930 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 GPR33Q49SQ1 333 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 LRRC73Q5JTD7 316 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 LYPLAL1Q5VWZ2 237 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ERAP2Q6P179 960 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 C16orf46Q6P387 395 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 C6orf89Q6UWU4 347 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PARS2Q7L3T8 475 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TAS2R42Q7RTR8 314 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TRIM42Q8IWZ5 723 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ZNF75CPQ92670 426 aaPredicted RBP20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PPP1R16AQ96I34 528 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PLEKHG4BQ96PX9 1271 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TTC1Q99614 292 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 POPDC3Q9HBV1 291 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PKD2L2Q9NZM6 624 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TMEM216Q9P0N5 145 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 STON1Q9Y6Q2 735 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ATXN2Q99700 1313 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 COL4A2P08572 1712 aa20.88■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TRBV5-4A0A0C4DH59 114 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 UBA6A0AVT1 1052 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 WDR91A4D1P6 747 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SPECC1L-ADORA2AF8WAN1 911 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 APOA4P06727 396 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 EPHX1P07099 455 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CTHP32929 405 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 GMPRP36959 345 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SPINT3P49223 89 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SUOXP51687 545 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CDKN2DP55273 166 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ZNF460Q14592 562 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 YTHDF3Q7Z739 585 aaKnown RBP20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CENPLQ8N0S6 344 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ANKS4BQ8N8V4 417 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CCDC63Q8NA47 563 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CCDC197Q8NCU1 140 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 GPR26Q8NDV2 337 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 DNASE1L2Q92874 299 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ACOX2Q99424 681 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PHF7Q9BWX1 381 aaPredicted RBP20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CCDC68Q9H2F9 335 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 ASB8Q9H765 288 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 KCNK12Q9HB15 430 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 PRSS16Q9NQE7 514 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CACNA2D2Q9NY47 1150 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 COMMD10Q9Y6G5 202 aa20.87■□□□□ 0.93
MAP1LC3A-201ENST00000360668 C1QTNF3-AMACRE9PGA6 284 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 K7EQS6 105 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 KLHL2O95198 593 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 WISP3O95389 354 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 BPGMP07738 259 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 MMP12P39900 470 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 SLC26A3P40879 764 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 CHRNA6Q15825 494 aa20.86■□□□□ 0.93
MAP1LC3A-201ENST00000360668 TSNAXIP1Q2TAA8 658 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms