RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MAN2A2P49641 1150 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TAS2R40P59535 323 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 DLG1Q12959 904 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 TNFAIP8L1Q8WVP5 186 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 C2orf49Q9BVC5 232 aaPredicted RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 MARK1Q9P0L2 795 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 URADA6NGE7 173 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 CHRM5P08912 532 aaPredicted RBP16■□□□□ 0.15
COL18A1-203ENST00000359759 CPTPQ5TA50 214 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 MSANTD1Q6ZTZ1 278 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 CADM2Q8N3J6 435 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 C12orf29Q8N999 325 aa16■□□□□ 0.15
COL18A1-203ENST00000359759 CDH5P33151 784 aaPredicted RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 NAA20P61599 178 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 SLC30A6Q6NXT4 461 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 TMPRSS11BQ86T26 416 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 MAP4K3Q8IVH8 894 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 NAT16Q8N8M0 369 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 RDH11Q8TC12 318 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 NECTIN3Q9NQS3 549 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 AASDHPPTQ9NRN7 309 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 IQCF5A8MTL0 148 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 PRH1P02810 166 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 CSH1P0DML2 217 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 CSH2P0DML3 217 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 DNASE1L1P49184 302 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 POLR2JP52435 117 aaKnown RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 VWA5B1Q5TIE3 1220 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 REP15Q6BDI9 236 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 AAGABQ6PD74 315 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 ANKS1BQ7Z6G8 1248 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 NAT14Q8WUY8 206 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 CST11Q9H112 138 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 TTYH1Q9H313 450 aaPredicted RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 C12orf65Q9H3J6 166 aaKnown RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 PRDM12Q9H4Q4 367 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 DPP7Q9UHL4 492 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 ATXN1P54253 815 aaKnown RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 C9orf64Q5T6V5 341 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 NT5DC1Q5TFE4 455 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 CFAP52Q8N1V2 620 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 ARMC10Q8N2F6 343 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 CDH22Q9UJ99 828 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 SAMD4AQ9UPU9 718 aaKnown RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 FABP3P05413 133 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 PGRP06401 933 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 GJA8P48165 433 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 SPERTQ8NA61 448 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 FAM210AQ96ND0 272 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 hCG_1818297A0A087WSY0 165 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 ZSCAN5BA6NJL1 495 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 TOR1BO14657 336 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 ABHD2P08910 425 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 POU2F1P14859 743 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 E2F2Q14209 437 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 KLHL5Q96PQ7 755 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 MFSD1Q9H3U5 465 aa15.99■□□□□ 0.15
COL18A1-203ENST00000359759 GPN3Q9UHW5 284 aaPredicted RBP15.99■□□□□ 0.15
COL18A1-203ENST00000359759 FAM86C2PA6NEL3 165 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 ZNF132P52740 706 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 THOC7Q6I9Y2 204 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 SATL1Q86VE3 508 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 PRELID2Q8N945 189 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 NKX2-3Q8TAU0 364 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 IFT46Q9NQC8 304 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 TIMM22Q9Y584 194 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 HMGB3O15347 200 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 SLC25A14O95258 325 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 APOC1P02654 83 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 RPL7AP62424 266 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 VPS26BQ4G0F5 336 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 GTPBP3Q969Y2 492 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 SEC14L3Q9UDX4 400 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 UMODL1Q5DID0 1318 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 GSC2O15499 205 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 AXLP30530 894 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 HECTD3Q5T447 861 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 SERPINA13PQ6UXR4 307 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 TMEM86AQ8N2M4 240 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 ZNF398Q8TD17 642 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 DNASE1L2Q92874 299 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 SLC39A8Q9C0K1 460 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 EIF3KQ9UBQ5 218 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 TET3O43151 1660 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 MYO3AQ8NEV4 1616 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 OR14I1A6ND48 311 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 IGFALSP35858 605 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 GNALP38405 381 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 GRSF1Q12849 480 aaKnown RBP eCLIP15.98■□□□□ 0.154e-11■□□□□ 9.8
COL18A1-203ENST00000359759 CLEC6AQ6EIG7 209 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 C5orf34Q96MH7 638 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 GBA2Q9HCG7 927 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 IMP3Q9NV31 184 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 TNFRSF11BO00300 401 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 GFOD2Q3B7J2 385 aa15.98■□□□□ 0.15
COL18A1-203ENST00000359759 CWF19L1Q69YN2 538 aaKnown RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
COL18A1-203ENST00000359759 ADAMTSL2Q86TH1 951 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms