RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CAB39LQ9H9S4 337 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 GPAMQ9HCL2 828 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 THAP1Q9NVV9 213 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 TAS2R13Q9NYV9 303 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 MARCH4Q9P2E8 410 aaPredicted RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 KLHL14Q9P2G3 628 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 WNT16Q9UBV4 365 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 FKBPLQ9UIM3 349 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 EMCNQ9ULC0 261 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 DUSP12Q9UNI6 340 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 RUVBL2Q9Y230 463 aaKnown RBP13.45□□□□□ -0.26
CCDC197-201ENST00000359253 ARL2BPQ9Y2Y0 163 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 VCANP13611 3396 aa13.45□□□□□ -0.26
CCDC197-201ENST00000359253 MYO10Q9HD67 2058 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 WDR91A4D1P6 747 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 DLL1O00548 723 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 BUD23O43709 281 aaKnown RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 SRP72O76094 671 aaKnown RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 WISP3O95389 354 aaPredicted RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 SERPINE1P05121 402 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 UGT2B4P06133 528 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 ALPIP09923 528 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 LTA4HP09960 611 aaKnown RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 ZNF7P17097 686 aaPredicted RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 CTPS1P17812 591 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 SAT1P21673 171 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 RPS3P23396 243 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 GJA4P35212 333 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 GRIA2P42262 883 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 ARHGEF7Q14155 803 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 PTPRCAPQ14761 206 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 HNRNPA1L2Q32P51 320 aaKnown RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 ITPRIPL2Q3MIP1 535 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 ZRANB3Q5FWF4 1079 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 DSG4Q86SJ6 1040 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 PHTF2Q8N3S3 785 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 CYB5D2Q8WUJ1 264 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 VOPP1Q96AW1 172 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 ULK4Q96C45 1275 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 KLHL32Q96NJ5 620 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 MRPL46Q9H2W6 279 aaKnown RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 PKD2L2Q9NZM6 624 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 NFKBIL1Q9UBC1 381 aaPredicted RBP13.44□□□□□ -0.26
CCDC197-201ENST00000359253 WASF2Q9Y6W5 498 aa13.44□□□□□ -0.26
CCDC197-201ENST00000359253 TRBV5-4A0A0C4DH59 114 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 AGAP14A8MT82 685 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 TTC34A8MYJ7 566 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 UPK3BL1B0FP48 263 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 UPK3BL2E5RIL1 263 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 F8W8V4 182 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 PSMD11O00231 422 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 PHGDHO43175 533 aaKnown RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 BNIP3LO60238 219 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 TRIM13O60858 407 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 SNNO75324 88 aaPredicted RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 VPS26AO75436 327 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CLDN7O95471 211 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ASGR2P07307 311 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 MYL2P10916 166 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 PKMP14618 531 aaKnown RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 GLULP15104 373 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 BGNP21810 368 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 GKP32189 559 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 VIPR1P32241 457 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 SERPINB5P36952 375 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ABCG1P45844 678 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 NAA20P61599 178 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 SIGLEC14Q08ET2 396 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ITGA9Q13797 1035 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 PCLAFQ15004 111 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CHI3L2Q15782 390 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CRY1Q16526 586 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ZNF789Q5FWF6 425 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 LRRC8EQ6NSJ5 796 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 C16orf46Q6P387 395 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CRTC1Q6UUV9 634 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 C6orf89Q6UWU4 347 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ZYG11AQ6WRX3 759 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 C12orf40Q86WS4 652 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CRLF3Q8IUI8 442 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 KIRREL3Q8IZU9 778 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CENPLQ8N0S6 344 aaPredicted RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 RBFAQ8N0V3 343 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 PLD6Q8N2A8 252 aaKnown RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 NKAPQ8N5F7 415 aaKnown RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 GBP7Q8N8V2 638 aaPredicted RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 CHST14Q8NCH0 376 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 ACVR1CQ8NER5 493 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 KCNJ9Q92806 393 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 PPP1R16AQ96I34 528 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 RPP25Q9BUL9 199 aaKnown RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 TRIM55Q9BYV6 548 aa13.43□□□□□ -0.26
CCDC197-201ENST00000359253 C12orf65Q9H3J6 166 aaKnown RBP13.43□□□□□ -0.26
CCDC197-201ENST00000359253 RABEP2Q9H5N1 569 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms