RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GPR142Q7Z601 462 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 COPS8Q99627 209 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 RTKNQ9BST9 563 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 TRAF6Q9Y4K3 522 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 EPHB6O15197 1021 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 NRP2O60462 931 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 FAM155BO75949 473 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 ADH1CP00326 375 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 BRCC3P46736 316 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 ESRP1Q6NXG1 681 aaKnown RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 ATCAYQ86WG3 371 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 PRELID2Q8N945 189 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 AP2M1Q96CW1 435 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 MCCC1Q96RQ3 725 aaPredicted RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 CFAP97Q9P2B7 532 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 IKZF2Q9UKS7 526 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 VWA7Q9Y334 891 aa18.33■□□□□ 0.52
SHANK1-202ENST00000359082 OAS3Q9Y6K5 1087 aaKnown RBP18.33■□□□□ 0.52
SHANK1-202ENST00000359082 FGF1P05230 155 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 MAGP20916 626 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 FAM91A1Q658Y4 838 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 USP50Q70EL3 339 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 OTOP3Q7RTS5 596 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 FCRL2Q96LA5 508 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 C5orf34Q96MH7 638 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 MAGEL2Q9UJ55 1249 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 RPTORQ8N122 1335 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 MATN4O95460 622 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 GET4Q7L5D6 327 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 GALNTL5Q7Z4T8 443 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 C12orf50Q8NA57 414 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 MRTO4Q9UKD2 239 aaKnown RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 TLL1O43897 1013 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 LYNP07948 512 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 UGCGQ16739 394 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 SPATA19Q7Z5L4 167 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 YTHDF3Q7Z739 585 aaKnown RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 PHYKPLQ8IUZ5 450 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 GRM6O15303 877 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 SERPINA1P01009 418 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 RAB2AP61019 212 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 HECTD2Q5U5R9 776 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 PSRC1Q6PGN9 363 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 C1GALT1C1Q96EU7 318 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 FTHL17Q9BXU8 183 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 ABCG4Q9H172 646 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 MAP4K5Q9Y4K4 846 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 CRYBB1P53674 252 aaPredicted RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 BNC1Q01954 994 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 TIGD2Q4W5G0 525 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 MEIOBQ8N635 442 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 ZBTB2Q8N680 514 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 SLCO1B3Q9NPD5 702 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 CKLFQ9UBR5 152 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 FBXO5Q9UKT4 447 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 SAMD4AQ9UPU9 718 aaKnown RBP18.32■□□□□ 0.52
SHANK1-202ENST00000359082 CNTNAP1P78357 1384 aa18.32■□□□□ 0.52
SHANK1-202ENST00000359082 RCCD1A6NED2 376 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 WNT3AP56704 352 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 CAPN13Q6MZZ7 669 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 CADM2Q8N3J6 435 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 GSTCDQ8NEC7 633 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 HAS1Q92839 578 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 DNASE1L2Q92874 299 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 RNF31Q96EP0 1072 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 GSDMCQ9BYG8 508 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 NKIRAS2Q9NYR9 191 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 FAM198AQ9UFP1 575 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 KIF20BQ96Q89 1820 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 AP2A2O94973 939 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 SAGP10523 405 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 TCEA1P23193 301 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 IL17AQ16552 155 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF697Q5TEC3 545 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF510Q9Y2H8 683 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 DGKBQ9Y6T7 804 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 BTNL10A8MVZ5 291 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 PRR5-ARHGAP8B1AHC4 643 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 NADKO95544 446 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 RPL5P46777 297 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 POLR2JP52435 117 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 ARHGAP8P85298 464 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 AKAP14Q86UN6 197 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 C17orf64Q86WR6 236 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 ZNF433Q8N7K0 673 aaPredicted RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 NDRG1Q92597 394 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 TDRD1Q9BXT4 1180 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 AGO3Q9H9G7 860 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 EXD2Q9NVH0 621 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 SLIT1O75093 1534 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 GLYATL1P3A0A0U1RQE8 302 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 IRGMA1A4Y4 181 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 DDX3YO15523 660 aaKnown RBP18.31■□□□□ 0.52
SHANK1-202ENST00000359082 PCDH1Q08174 1060 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 DUPD1Q68J44 220 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 BEND5Q7L4P6 421 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 OR2T12Q8NG77 320 aa18.31■□□□□ 0.52
SHANK1-202ENST00000359082 AGXT2Q9BYV1 514 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms