RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CCNJLQ8IV13 435 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 PYROXD1Q8WU10 500 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 DNASE2BQ8WZ79 361 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 CDKN2AIPNLQ96HQ2 116 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 TBATAQ96M53 351 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 IL26Q9NPH9 171 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 MBNL1Q9NR56 388 aaKnown RBP15.17■□□□□ 0.02
TPM1-206ENST00000358278 TREX1Q9NSU2 369 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 CA5BQ9Y2D0 317 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 ZFC3H1O60293 1989 aaKnown RBP15.17■□□□□ 0.02
TPM1-206ENST00000358278 K7ESM1 405 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 TTC4O95801 387 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 PYGLP06737 847 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 TNFRSF8P28908 595 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 MC4RP32245 332 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 CLDN2P57739 230 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 ITGA9Q13797 1035 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 STAT4Q14765 748 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 ANKRD20A4Q4UJ75 823 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 PTAR1Q7Z6K3 402 aaPredicted RBP15.17■□□□□ 0.02
TPM1-206ENST00000358278 IGDCC3Q8IVU1 814 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 GSPT2Q8IYD1 628 aaKnown RBP15.17■□□□□ 0.02
TPM1-206ENST00000358278 TMEM145Q8NBT3 493 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 PLA2G15Q8NCC3 412 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 OR6P1Q8NGX9 317 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 ATOH1Q92858 354 aaPredicted RBP15.17■□□□□ 0.02
TPM1-206ENST00000358278 HDAC10Q969S8 669 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 SLC6A18Q96N87 628 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 ORAI3Q9BRQ5 295 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 KCNH6Q9H252 994 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 SUDS3Q9H7L9 328 aaPredicted RBP15.17■□□□□ 0.02
TPM1-206ENST00000358278 HCN4Q9Y3Q4 1203 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 SLC30A1Q9Y6M5 507 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 LRP4O75096 1905 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 POM121BA6NF01 834 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 A6NNZ2 444 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 H0Y8X5 98 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 H7C0S8 307 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 SRP72O76094 671 aaKnown RBP15.16■□□□□ 0.02
TPM1-206ENST00000358278 GNSP15586 552 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 MCM3P25205 808 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 ARSDP51689 593 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 ACVR1Q04771 509 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 INPP5AQ14642 412 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 CRYMQ14894 314 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 PNCKQ6P2M8 343 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 AFTPHQ6ULP2 937 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 GCNT7Q6ZNI0 430 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 TMEM135Q86UB9 458 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 PELI3Q8N2H9 469 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 TRAM1L1Q8N609 369 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 EIF1ADQ8N9N8 165 aaKnown RBP15.16■□□□□ 0.02
TPM1-206ENST00000358278 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
TPM1-206ENST00000358278 AGAP2Q99490 1192 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 WDR83Q9BRX9 315 aaKnown RBP15.16■□□□□ 0.02
TPM1-206ENST00000358278 WDR26Q9H7D7 661 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 SMG5Q9UPR3 1016 aaKnown RBP15.16■□□□□ 0.02
TPM1-206ENST00000358278 SLCO1B1Q9Y6L6 691 aa15.16■□□□□ 0.02
TPM1-206ENST00000358278 DNAH14Q0VDD8 3507 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 CCDC162PA2VCL2 907 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 GAPDHSO14556 408 aaPredicted RBP15.15■□□□□ 0.02
TPM1-206ENST00000358278 BCAT2O15382 392 aaPredicted RBP15.15■□□□□ 0.02
TPM1-206ENST00000358278 VAPBO95292 243 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 ITGALP20701 1170 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 MAGEA4P43358 317 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 VSNL1P62760 191 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 RACK1P63244 317 aaKnown RBP15.15■□□□□ 0.02
TPM1-206ENST00000358278 CBLBQ13191 982 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 NFATC2Q13469 925 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 PEX6Q13608 980 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 ZRANB3Q5FWF4 1079 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 SPANXN3Q5MJ09 141 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 PDPK2PQ6A1A2 396 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 KIAA0930Q6ICG6 404 aaPredicted RBP15.15■□□□□ 0.02
TPM1-206ENST00000358278 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
TPM1-206ENST00000358278 CAPN12Q6ZSI9 719 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 NLRP8Q86W28 1048 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 HEATR4Q86WZ0 1026 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 PALM2Q8IXS6 379 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 OTUD6BQ8N6M0 293 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 PIGKQ92643 395 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 C9orf72Q96LT7 481 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 FCRL3Q96P31 734 aaPredicted RBP15.15■□□□□ 0.02
TPM1-206ENST00000358278 ASB8Q9H765 288 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 TM9SF3Q9HD45 589 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 SUSD2Q9UGT4 822 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 OR1A2Q9Y585 309 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 HS3ST3A1Q9Y663 406 aa15.15■□□□□ 0.02
TPM1-206ENST00000358278 OR51F1A6NGY5 319 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 FADS2P1A8MWK0 482 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 INPP4BO15327 924 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 GPR39O43194 453 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 GOT2P00505 430 aaKnown RBP15.14■□□□□ 0.01
TPM1-206ENST00000358278 MYBL2P10244 700 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 PSMA3P25788 255 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 CD38P28907 300 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 DPP6P42658 865 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 XIAPP98170 497 aa15.14■□□□□ 0.01
TPM1-206ENST00000358278 SMAD1Q15797 465 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms