RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MAPRE2Q15555 327 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 PDCD2Q16342 344 aaPredicted RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 PIGGQ5H8A4 983 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 OGFRL1Q5TC84 451 aaPredicted RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 SLC22A9Q8IVM8 553 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 BBS5Q8N3I7 341 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 PNPLA1Q8N8W4 532 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 SMRP1Q8NCR6 262 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 CATSPER1Q8NEC5 780 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 OR7D4Q8NG98 312 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 GPR150Q8NGU9 434 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 BLOC1S5Q8TDH9 187 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 OVCA2Q8WZ82 227 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 DNAJC1Q96KC8 554 aaKnown RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 TBATAQ96M53 351 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 CATSPER2Q96P56 530 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 TSC22D3Q99576 134 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 TRMOQ9BU70 441 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 YIPF3Q9GZM5 350 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 GTSE1Q9NYZ3 720 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 CD207Q9UJ71 328 aa14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 G3BP2Q9UN86 482 aaKnown RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 ZFP37Q9Y6Q3 630 aaPredicted RBP14.27□□□□□ -0.13
NIPAL3-203ENST00000358028 A0A0D9SEW6 157 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 SDHDO14521 159 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 RPP40O75818 363 aaKnown RBP14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 SERPINF2P08697 491 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 HOXB8P17481 243 aaPredicted RBP14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 CDH4P55283 916 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 MED21Q13503 144 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 TRIP10Q15642 601 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF423Q2M1K9 1284 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 NXNQ6DKJ4 435 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 CHSY3Q70JA7 882 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 PQLC1Q8N2U9 271 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 ANKRD49Q8WVL7 239 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 RCN3Q96D15 328 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 GBP5Q96PP8 586 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 MGME1Q9BQP7 344 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 NACA2Q9H009 215 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 CYP4F12Q9HCS2 524 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 TRPC7Q9HCX4 862 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 SEPT3Q9UH03 358 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 RIMKLBQ9ULI2 386 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 ARL5AQ9Y689 179 aa14.26□□□□□ -0.13
NIPAL3-203ENST00000358028 CCDC162PA2VCL2 907 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 GRXCR2A6NFK2 248 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 TMEM233B4DJY2 109 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 CD3EAPO15446 510 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 SMIM24O75264 130 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 RFPL2O75678 378 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 IPO13O94829 963 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 NDST3O95803 873 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 FDXRP22570 491 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 TUFMP49411 452 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 ERFP50548 548 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 ART3Q13508 389 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 SFT2D3Q587I9 215 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 RARS2Q5T160 578 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 TMEM207Q6UWW9 146 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 ST13P4Q8IZP2 240 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 PELI3Q8N2H9 469 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 KREMEN2Q8NCW0 462 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 OR52K2Q8NGK3 314 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 BRSK1Q8TDC3 778 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 PLD4Q96BZ4 506 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF512Q96ME7 567 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 TRIB3Q96RU7 358 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 CDRT15Q96T59 188 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 S1PR5Q9H228 398 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 SUDS3Q9H7L9 328 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 WDR41Q9HAD4 459 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 DZANK1Q9NVP4 752 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 UBA2Q9UBT2 640 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 COPG1Q9Y678 874 aaKnown RBP14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 NOTCH4Q99466 2003 aa14.25□□□□□ -0.13
NIPAL3-203ENST00000358028 ANKRD36A6QL64 1941 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 MBTPS2O43462 519 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 KDELR3O43731 214 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 UBTFL6P0CB48 400 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 HNRNPLP14866 589 aaKnown RBP eCLIP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 IL9P15248 144 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 OGNP20774 298 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ME2P23368 584 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PEX2P28328 305 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PSMD8P48556 350 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 CCNHP51946 323 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 INHBCP55103 352 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 OXCT1P55809 520 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SULT2A1Q06520 285 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 FLOT2Q14254 428 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SQLEQ14534 574 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PTPRCAPQ14761 206 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms