RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 UGT1A7Q9HAW7 530 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A10Q9HAW8 530 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 UGT1A8Q9HAW9 530 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 ZSCAN32Q9NX65 697 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 SLC17A6Q9P2U8 582 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 TMPRSS11EQ9UL52 423 aa25.27■■□□□ 1.64
SSBP3-202ENST00000357475 GON4LQ3T8J9 2241 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 SPAG17Q6Q759 2223 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 RGSL1A5PLK6 1076 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 H7C0S8 307 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 PRAMEF1O95521 474 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 ACSL3O95573 720 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 ERVK-10P10266 1014 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 HADHAP40939 763 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 PTGER3P43115 390 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 CLDN2P57739 230 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 PRAMEP78395 509 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 SEMA3AQ14563 771 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 ARMC3Q5W041 872 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 C3orf62Q6ZUJ4 267 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 PTAR1Q7Z6K3 402 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-202ENST00000357475 CCNJLQ8IV13 435 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 ZBTB44Q8NCP5 570 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 CADM4Q8NFZ8 388 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 OR6P1Q8NGX9 317 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 SPATA16Q9BXB7 569 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 FAM126AQ9BYI3 521 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-202ENST00000357475 MARCH4Q9P2E8 410 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-202ENST00000357475 NFKBIL1Q9UBC1 381 aaPredicted RBP25.26■■□□□ 1.63
SSBP3-202ENST00000357475 FANCMQ8IYD8 2048 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 DMDP11532 3685 aa25.26■■□□□ 1.63
SSBP3-202ENST00000357475 SRP72O76094 671 aaKnown RBP25.25■■□□□ 1.63
SSBP3-202ENST00000357475 TTC4O95801 387 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 LRRC14Q15048 493 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 ATP13A5Q4VNC0 1218 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 PSAPL1Q6NUJ1 521 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 CEP128Q6ZU80 1094 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 UHMK1Q8TAS1 419 aaKnown RBP25.25■■□□□ 1.63
SSBP3-202ENST00000357475 FUBP1Q96AE4 644 aaKnown RBP25.25■■□□□ 1.63
SSBP3-202ENST00000357475 C20orf96Q9NUD7 363 aaPredicted RBP25.25■■□□□ 1.63
SSBP3-202ENST00000357475 SDK1Q7Z5N4 2213 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 MYO15AQ9UKN7 3530 aa25.25■■□□□ 1.63
SSBP3-202ENST00000357475 H0Y8X5 98 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 TUBBP07437 444 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 FOXN2P32314 431 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 LONRF1Q17RB8 773 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 SETMARQ53H47 684 aaPredicted RBP25.24■■□□□ 1.63
SSBP3-202ENST00000357475 ZNF765Q7L2R6 523 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 LDB1Q86U70 411 aaPredicted RBP25.24■■□□□ 1.63
SSBP3-202ENST00000357475 PIANPQ8IYJ0 282 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 GSDMBQ8TAX9 411 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 ASB12Q8WXK4 309 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 C19orf43Q9BQ61 176 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 VPS37BQ9H9H4 285 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 SMYD2Q9NRG4 433 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 MOCS1Q9NZB8 636 aa25.24■■□□□ 1.63
SSBP3-202ENST00000357475 A0A1W2PPC4 97 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 TCRBV9S1A1TA0A576 114 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 POM121BA6NF01 834 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 C1QAP02745 245 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 DPTQ07507 201 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 INPP5AQ14642 412 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 UAP1Q16222 522 aaPredicted RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 RAET1GQ6H3X3 334 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 PNCKQ6P2M8 343 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 EMBQ6PCB8 327 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 AFTPHQ6ULP2 937 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 RAVER1Q8IY67 606 aaKnown RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 CAVIN3Q969G5 261 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 CCDC97Q96F63 343 aaPredicted RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 CERS2Q96G23 380 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 LENG8Q96PV6 779 aaPredicted RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 DUSP15Q9H1R2 295 aaPredicted RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 ARFGAP3Q9NP61 516 aa25.23■■□□□ 1.63
SSBP3-202ENST00000357475 EIF2B4Q9UI10 523 aaKnown RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 CNOT6Q9ULM6 557 aaKnown RBP25.23■■□□□ 1.63
SSBP3-202ENST00000357475 UQCRHLA0A096LP55 91 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 INPP4BO15327 924 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 RIPK2O43353 540 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 UQCRHP07919 91 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 HNRNPA2B1P22626 353 aaKnown RBP25.22■■□□□ 1.63
SSBP3-202ENST00000357475 NFATC2Q13469 925 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 EFTUD2Q15029 972 aaKnown RBP eCLIP25.22■■□□□ 1.634e-7■■■■■ 32.3
SSBP3-202ENST00000357475 HSP90AA5PQ58FG0 334 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 ZRANB3Q5FWF4 1079 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 ZDHHC20Q5W0Z9 365 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 PMS2CLQ68D20 193 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 GCNT7Q6ZNI0 430 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 KCNMB4Q86W47 210 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 TRAM1L1Q8N609 369 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 TMEM145Q8NBT3 493 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 OR4L1Q8NH43 312 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 ZNF398Q8TD17 642 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 FBF1Q8TES7 1133 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 BMFQ96LC9 184 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 PCED1AQ9H1Q7 454 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 ASB8Q9H765 288 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 RAD18Q9NS91 495 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 APPL1Q9UKG1 709 aa25.22■■□□□ 1.63
SSBP3-202ENST00000357475 OR1A2Q9Y585 309 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms