RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 ZNF701M0R085 212 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 BMP10O95393 424 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 AP2A1O95782 977 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 HNRNPA1P09651 372 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 TACR2P21452 398 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 IGFBP4P22692 258 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 GRIA4P48058 902 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 SLC11A2P49281 568 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 RPS24P62847 133 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 RHDQ02161 417 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 TRAP1Q12931 704 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ART3Q13508 389 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 GRIN2CQ14957 1233 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 PDK1Q15118 436 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 DLG2Q15700 870 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ARTNQ5T4W7 220 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 DUS1LQ6P1R4 473 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 KLHL35Q6PF15 583 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 PELI3Q8N2H9 469 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ADAMTS16Q8TE57 1224 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 STYXQ8WUJ0 223 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 RANBP9Q96S59 729 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 GPR22Q99680 433 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 COQ10BQ9H8M1 238 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 PNPLA3Q9NST1 481 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 OLAHQ9NV23 265 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 DPP7Q9UHL4 492 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 PCDHGA7Q9Y5G6 932 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 COPG1Q9Y678 874 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 NYNRINQ9P2P1 1898 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 TCRBV3S1A0A5B6 114 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 F5H5T6 163 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 STX16-NPEPL1H3BU86 382 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 CFLARO15519 480 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 HOXA9P31269 272 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 MSX2P35548 267 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 RGS19P49795 217 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 GALK1P51570 392 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 MLLT1Q03111 559 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 DLX2Q07687 328 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 KCNC3Q14003 757 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 MANEALQ5VSG8 457 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 Q6ZNX1 250 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ARHGAP36Q6ZRI8 547 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ZNF554Q86TJ5 538 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 RIN3Q8TB24 985 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ATP6V1E2Q96A05 226 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ZNF669Q96BR6 464 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 PLD4Q96BZ4 506 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 C1orf74Q96LT6 269 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 CCT7Q99832 543 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ANKRD60Q9BZ19 345 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 NUF2Q9BZD4 464 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 NSUN3Q9H649 340 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 CAB39LQ9H9S4 337 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 FAIMQ9NVQ4 179 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 TUBA8Q9NY65 449 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 SH3BP1Q9Y3L3 701 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 AP4S1Q9Y587 144 aa12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 ZFP37Q9Y6Q3 630 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-202ENST00000357348 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 MAGEB16A2A368 324 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM64A6NGJ6 449 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 KCNK1O00180 336 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 NEMP1O14524 444 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 TRIM24O15164 1050 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 PRAMEF12O95522 483 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 OLFM2O95897 454 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 COL6A2P12110 1019 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 HCAR3P49019 387 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SFSWAPQ12872 951 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 MPP3Q13368 585 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 TMEM198Q66K66 360 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 TPGS1Q6ZTW0 290 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 CHSY3Q70JA7 882 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 ZNF683Q8IZ20 524 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 KDM1BQ8NB78 822 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 ACVR1CQ8NER5 493 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 OR52K1Q8NGK4 314 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 EME1Q96AY2 570 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 ZYG11BQ9C0D3 744 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 CATSPERBQ9H7T0 1116 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 MRGBPQ9NV56 204 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 RHBDL2Q9NX52 303 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 G3BP2Q9UN86 482 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 LEFTY2O00292 366 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 EPHA5P54756 1037 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 PTK2BQ14289 1009 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 SMAD1Q15797 465 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 ANO4Q32M45 955 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 ARHGAP15Q53QZ3 475 aa12.65□□□□□ -0.38
RTFDC1-202ENST00000357348 ELMSAN1Q6PJG2 1045 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms