RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 TPD52P55327 224 aaPredicted RBP10.11□□□□□ -0.79
PTPRA-203ENST00000356147 OXCT1P55809 520 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 MEP1AQ16819 746 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 RGS21Q2M5E4 152 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 SLC2A7Q6PXP3 512 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 R3HCC1LQ7Z5L2 792 aaKnown RBP10.11□□□□□ -0.79
PTPRA-203ENST00000356147 AQP12AQ8IXF9 295 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 DQX1Q8TE96 717 aaKnown RBP10.11□□□□□ -0.79
PTPRA-203ENST00000356147 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
PTPRA-203ENST00000356147 NTAN1Q96AB6 310 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 TMEM125Q96AQ2 219 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 PPP1R14BQ96C90 147 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF560Q96MR9 790 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 HERC2P3Q9BVR0 1158 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 NANOGQ9H9S0 305 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 TUBA8Q9NY65 449 aaPredicted RBP10.11□□□□□ -0.79
PTPRA-203ENST00000356147 ANAPC2Q9UJX6 822 aa10.11□□□□□ -0.79
PTPRA-203ENST00000356147 H0Y858 1186 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 AZIN1O14977 448 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 ANXA9O76027 345 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 CCR1P32246 355 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 TMED10P49755 219 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 AGTR2P50052 363 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 DSC2Q02487 901 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 AQP6Q13520 282 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 SELPLGQ14242 412 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 PGS1Q32NB8 556 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 DALRD3Q5D0E6 543 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 LCN8Q6JVE9 175 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 SPRED1Q7Z699 444 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 C14orf80Q86SX3 495 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 FAM86B1Q8N7N1 296 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 OR13J1Q8NGT2 312 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 ZUFSPQ96AP4 578 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 TAMM41Q96BW9 452 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 ROPN1LQ96C74 230 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 UBXN10Q96LJ8 280 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 CDK15Q96Q40 435 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 FCRL5Q96RD9 977 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 VAT1Q99536 393 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 TRIM15Q9C019 465 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 TLR9Q9NR96 1032 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 PTBP2Q9UKA9 531 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 OAS3Q9Y6K5 1087 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 J3KR12 359 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 PRKACGP22612 351 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 EEF1DP29692 281 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 PLA2G16P53816 162 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 SPIDRQ14159 915 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 BTG3Q14201 252 aaPredicted RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 MOGQ16653 247 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 SV2CQ496J9 727 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 PDCD4Q53EL6 469 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 TAPT1Q6NXT6 567 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 LPPQ93052 612 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 SDCCAG3Q96C92 435 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 FEM1CQ96JP0 617 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 SENP8Q96LD8 212 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 ADAMTS10Q9H324 1103 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 POLR3BQ9NW08 1133 aaPredicted RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 GDAP2Q9NXN4 497 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 ABCD2Q9UBJ2 740 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 IKZF3Q9UKT9 509 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 PCDHA9Q9Y5H5 950 aa10.1□□□□□ -0.79
PTPRA-203ENST00000356147 POLR2AP24928 1970 aaKnown RBP10.1□□□□□ -0.79
PTPRA-203ENST00000356147 LAMA3Q16787 3333 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 DNAJC25-GNG10A0A024R161 153 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 UBA6A0AVT1 1052 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 KRBA1A5PL33 1030 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SUPT3HB4E1H0 165 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PAGE1O75459 146 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CD4P01730 458 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 NFKBIAP25963 317 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ADRA1AP35348 466 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 GGT5P36269 586 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ACADVLP49748 655 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 HERVK_113P63132 956 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 YWHAHQ04917 246 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ACAP2Q15057 778 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CCNYL2Q5T2Q4 361 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 XAF1Q6GPH4 301 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 KIAA0930Q6ICG6 404 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 UGT3A1Q6NUS8 523 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 RANBP10Q6VN20 620 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 DNAJC14Q6Y2X3 702 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 APOBEC3FQ8IUX4 373 aaKnown RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 OR13F1Q8NGS4 319 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 BLOC1S5Q8TDH9 187 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ADAMTS16Q8TE57 1224 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SLC35B4Q969S0 331 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SMIM14Q96QK8 99 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SLC9A7Q96T83 725 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 HOPXQ9BPY8 73 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ERVK-6Q9BXR3 956 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 GID8Q9NWU2 228 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 VPS51Q9UID3 782 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 INVSQ9Y283 1065 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms