RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LSMEM2Q8N112 164 aa17.14■□□□□ 0.33
VPS13B-201ENST00000355155 NKAPQ8N5F7 415 aaKnown RBP17.14■□□□□ 0.33
VPS13B-201ENST00000355155 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
VPS13B-201ENST00000355155 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.14■□□□□ 0.33
VPS13B-201ENST00000355155 KIAA1191Q96A73 305 aa17.14■□□□□ 0.33
VPS13B-201ENST00000355155 TRMOQ9BU70 441 aa17.14■□□□□ 0.33
VPS13B-201ENST00000355155 C1QTNF3Q9BXJ4 246 aa17.14■□□□□ 0.33
VPS13B-201ENST00000355155 SRP72O76094 671 aaKnown RBP17.13■□□□□ 0.33
VPS13B-201ENST00000355155 T-ENOLP0DO92 83 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 GEN1Q17RS7 908 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 TXNDC5Q8NBS9 432 aaKnown RBP17.13■□□□□ 0.33
VPS13B-201ENST00000355155 ASIC4Q96FT7 647 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 HEPHQ9BQS7 1158 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 HEY2Q9UBP5 337 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 VTI1BQ9UEU0 232 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 WASF2Q9Y6W5 498 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 MYOFQ9NZM1 2061 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 IGLV3-16A0A075B6K0 115 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 H3BMM5 538 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 PYGLP06737 847 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 ALPIP09923 528 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 SPAM1P38567 509 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 DGKGP49619 791 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 POLR2LP62875 67 aaKnown RBP17.13■□□□□ 0.33
VPS13B-201ENST00000355155 CSHL1Q14406 222 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 PPP2R2DQ66LE6 453 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
VPS13B-201ENST00000355155 FGF13Q92913 245 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 ERP27Q96DN0 273 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 SCYL1Q96KG9 808 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 RPL10LQ96L21 214 aaKnown RBP17.13■□□□□ 0.33
VPS13B-201ENST00000355155 ATOH8Q96SQ7 321 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 ARHGEF3Q9NR81 526 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 SMOXQ9NWM0 555 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 APOBEC2Q9Y235 224 aaKnown RBP17.13■□□□□ 0.33
VPS13B-201ENST00000355155 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 BPTFQ12830 3046 aa17.13■□□□□ 0.33
VPS13B-201ENST00000355155 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 CCDC22O60826 627 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 LYPLA1O75608 230 aaPredicted RBP17.12■□□□□ 0.33
VPS13B-201ENST00000355155 SERPINA6P08185 405 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 BPIP17213 487 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 EIF2DP41214 584 aaKnown RBP17.12■□□□□ 0.33
VPS13B-201ENST00000355155 EPGNQ6UW88 154 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
VPS13B-201ENST00000355155 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 RAD18Q9NS91 495 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 SLCO3A1Q9UIG8 710 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 A8MT66 165 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 IPO13O94829 963 aaKnown RBP17.12■□□□□ 0.33
VPS13B-201ENST00000355155 PRSS56P0CW18 603 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 METTL21CQ5VZV1 264 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 UGT3A1Q6NUS8 523 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 SYCE2Q6PIF2 218 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 PTCD3Q96EY7 689 aaKnown RBP17.12■□□□□ 0.33
VPS13B-201ENST00000355155 LRMDAQ9H2I8 198 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 IL26Q9NPH9 171 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
VPS13B-201ENST00000355155 A0A0G2JND7 137 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 NPIPB15A6NHN6 443 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 MATN2O00339 956 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 TSPAN12O95859 305 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CTPS1P17812 591 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 IMPDH1P20839 514 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 ACRV1P26436 265 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 NFATC2Q13469 925 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 ILKAPQ9H0C8 392 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 NSUN3Q9H649 340 aaKnown RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CDH7Q9ULB5 785 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 SLC30A1Q9Y6M5 507 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 C1orf232A0A0U1RR37 186 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 KERAO60938 352 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 SAT1P21673 171 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 SP100P23497 879 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CLCN7P51798 805 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 AQP5P55064 265 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 HYAL1Q12794 435 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 PIM3Q86V86 326 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 PTERQ96BW5 349 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 TTC1Q99614 292 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 ECT2Q9H8V3 914 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 NCKIPSDQ9NZQ3 722 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 DHRS7Q9Y394 339 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 PRMT5O14744 637 aaPredicted RBP17.11■□□□□ 0.33
VPS13B-201ENST00000355155 VPS26AO75436 327 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 CLDN7O95471 211 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 ITGALP20701 1170 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 NFKBIAP25963 317 aa17.11■□□□□ 0.33
VPS13B-201ENST00000355155 GKP32189 559 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms