RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 FAM153CQ494X1 144 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CWF19L1Q69YN2 538 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 HDAC10Q969S8 669 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CEP295NLQ96MC4 621 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 RBM4BQ9BQ04 359 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 RBM4Q9BWF3 364 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF490Q9ULM2 529 aaPredicted RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MAP4K5Q9Y4K4 846 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 BCKDKO14874 412 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 DDX3YO15523 660 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 EIF4BP23588 611 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PTDSS1P48651 473 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FAM83AQ86UY5 434 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 C10orf107Q8IVU9 208 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 HEXDCQ8WVB3 486 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 TCF12Q99081 682 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MEMO1Q9Y316 297 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PLK4O00444 970 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 P4HA3Q7Z4N8 544 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 POLNQ7Z5Q5 900 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ALLCQ8N6M5 410 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 KAT2AQ92830 837 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FADS2P1A8MWK0 482 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CXCL14O95715 111 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PAX7P23759 505 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 GRK5P34947 590 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 LIPEQ05469 1076 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 UNC93AQ86WB7 457 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 KIAA0895Q8NCT3 520 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 OR4C6Q8NH72 309 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MCFD2Q8NI22 146 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 EURLQ9NYK6 297 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 AP5Z1O43299 807 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CDC25CP30307 473 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ADAMTS12P58397 1594 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CYP4F8P98187 520 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 GFOD2Q3B7J2 385 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 RUNDC3AQ59EK9 446 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 SYVN1Q86TM6 617 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MFSD14AQ96MC6 490 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ERVK-11Q9UQG0 969 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 UGT2B11O75310 529 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FADS2O95864 444 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FSHRP23945 695 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CCNYL2Q5T2Q4 361 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 RBM44Q6ZP01 1051 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 TMEM192Q8IY95 271 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 C11orf65Q8NCR3 313 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 GIPC3Q8TF64 312 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC16A10Q8TF71 515 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 F8VP50 259 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 C2orf80Q0P641 193 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MAPK14Q16539 360 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 SLCO6A1Q86UG4 719 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 DIRAS2Q96HU8 199 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF224Q9NZL3 707 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ALOX5P09917 674 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 DDX6P26196 483 aaKnown RBP eCLIP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ASMTP46597 345 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 NR1H2P55055 460 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MADCAM1Q13477 382 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 DUPD1Q68J44 220 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ARCQ7LC44 396 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 OR14C36Q8NHC7 312 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 HTRA1Q92743 480 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 DGCR14Q96DF8 476 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FPGTO14772 594 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 GLUD1P00367 558 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 E2F2Q14209 437 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PSMD5Q16401 504 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ABCA11PQ4W5N1 156 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ZDHHC20Q5W0Z9 365 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 AMIGO2Q86SJ2 522 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ZZZ3Q8IYH5 903 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 LACRTQ9GZZ8 138 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PHPT1Q9NRX4 125 aaPredicted RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MAGEL2Q9UJ55 1249 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 L7N2F9 121 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FGF19O95750 216 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 TGFB2P61812 414 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 VAMP2P63027 116 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF844Q08AG5 666 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 THAP5Q7Z6K1 395 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PRPF19Q9UMS4 504 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 TRUB2O95900 331 aaKnown RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 PLGP00747 810 aaPredicted RBP5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ITGAVP06756 1048 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ALPPL2P10696 532 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 OCLNQ16625 522 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 KCTD4Q8WVF5 259 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 SMURF1Q9HCE7 757 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 POLLQ9UGP5 575 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 FAM92BQ6ZTR7 304 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 ZBTB46Q86UZ6 589 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 CERKQ8TCT0 537 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 HELQQ8TDG4 1101 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 MTMR8Q96EF0 704 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 DNAJC18Q9H819 358 aa5.76□□□□□ -1.49
SRGAP1-201ENST00000355086 USP20Q9Y2K6 914 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms