RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 XPR1Q9UBH6 696 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 HCN4Q9Y3Q4 1203 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 SCN4AP35499 1836 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 NOBOXO60393 691 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 GRAP2O75791 330 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 ICAM2P13598 275 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 TRAF3Q13114 568 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 KRR1Q13601 381 aaKnown RBP13.21□□□□□ -0.29
IFT88-202ENST00000351808 GALNT3Q14435 633 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 TPRG1LQ5T0D9 272 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 PNCKQ6P2M8 343 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 HORMAD1Q86X24 394 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 RDH11Q8TC12 318 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 MCOLN3Q8TDD5 553 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.29
IFT88-202ENST00000351808 STYXQ8WUJ0 223 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 ZBTB45Q96K62 511 aaPredicted RBP13.21□□□□□ -0.29
IFT88-202ENST00000351808 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 RIT2Q99578 217 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 HOPXQ9BPY8 73 aaPredicted RBP13.21□□□□□ -0.29
IFT88-202ENST00000351808 C17orf62Q9BQA9 187 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 C1QTNF1Q9BXJ1 281 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 PRRG3Q9BZD7 231 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 OSBPL2Q9H1P3 480 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 PIF1Q9H611 641 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 GABBR1Q9UBS5 961 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.29
IFT88-202ENST00000351808 VPS4AQ9UN37 437 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 ITGB4P16144 1822 aa13.21□□□□□ -0.29
IFT88-202ENST00000351808 NEMP2A6NFY4 417 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 FXYD1O00168 92 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 NOS1APO75052 506 aaPredicted RBP13.21□□□□□ -0.3
IFT88-202ENST00000351808 MLNP12872 115 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 ITGB5P18084 799 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 ACVR2AP27037 513 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.3
IFT88-202ENST00000351808 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.3
IFT88-202ENST00000351808 ESCO2Q56NI9 601 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.3
IFT88-202ENST00000351808 TSTD2Q5T7W7 516 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 RHOBTB2Q9BYZ6 727 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 MMP27Q9H306 513 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 TIGARQ9NQ88 270 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 TRMT13Q9NUP7 481 aaKnown RBP13.21□□□□□ -0.3
IFT88-202ENST00000351808 C14orf119Q9NWQ9 140 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 USP22Q9UPT9 525 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 NAALAD2Q9Y3Q0 740 aa13.21□□□□□ -0.3
IFT88-202ENST00000351808 A0A0J9YYE9 177 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 OR5K3A6NET4 321 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 UPK1AO00322 258 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 USP2O75604 605 aaPredicted RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 GSK3BP49841 420 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 NDST1P52848 882 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ORC1Q13415 861 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 GRM3Q14832 879 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 RABL3Q5HYI8 236 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 FAM102AQ5T9C2 384 aaPredicted RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 TAS1R3Q7RTX0 852 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 SIAH1Q8IUQ4 282 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 COLGALT1Q8NBJ5 622 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 GLB1L3Q8NCI6 653 aaPredicted RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 CNIH3Q8TBE1 160 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 DNAJB14Q8TBM8 379 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 METTL2AQ96IZ6 378 aaKnown RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 VPS39Q96JC1 886 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 HEXIM2Q96MH2 286 aaKnown RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 RIPOR3Q96MK2 946 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ADPGKQ9BRR6 497 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 NUAK2Q9H093 628 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ZBTB20Q9HC78 741 aaPredicted RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 PRDM8Q9NQV8 689 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 KCNH7Q9NS40 1196 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 EHD3Q9NZN3 535 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 EFCAB9A8MZ26 197 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 PLK4O00444 970 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 OR7A10O76100 309 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ATG7O95352 703 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 PGK2P07205 417 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 CD6P30203 668 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 HCAR3P49019 387 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ENPEPQ07075 957 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 FRG1Q14331 258 aaKnown RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 NFIXQ14938 502 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 ACOX1Q15067 660 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 KIF19Q2TAC6 998 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 HEATR6Q6AI08 1181 aaKnown RBP13.2□□□□□ -0.3
IFT88-202ENST00000351808 TRNP1Q6NT89 227 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 VN1R5Q7Z5H4 357 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 NRARPQ7Z6K4 114 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
IFT88-202ENST00000351808 WDR49Q8IV35 697 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms