RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PRSS56P0CW18 603 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 SLC1A2P43004 574 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 CACNG1Q06432 222 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 NFATC2Q13469 925 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 FASTKD1Q53R41 847 aaKnown RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 KIAA0408Q6ZU52 694 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 SNX20Q7Z614 316 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 TDRPQ86YL5 185 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 DCAKDQ8WVC6 231 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 MCMBPQ9BTE3 642 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 NSMCE4AQ9NXX6 385 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 FBXO5Q9UKT4 447 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 SLC30A1Q9Y6M5 507 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 TRPM6Q9BX84 2022 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 TRBV5-4A0A0C4DH59 114 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 GPR39O43194 453 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 RNGTTO60942 597 aaKnown RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 ZNF217O75362 1048 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 OGNP20774 298 aaKnown RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 OXTRP30559 389 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 CDKN1CP49918 316 aaPredicted RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 DPTQ07507 201 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 CTBP1Q13363 440 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 RASA2Q15283 850 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 TYSND1Q2T9J0 566 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 MAP7D1Q3KQU3 841 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 MRNIPQ6NTE8 343 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 PSAPL1Q6NUJ1 521 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 GALNT7Q86SF2 657 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 NLRP8Q86W28 1048 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 HORMAD1Q86X24 394 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 OR2T34Q8NGX1 318 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 GABPB2Q8TAK5 448 aaPredicted RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 SCG3Q8WXD2 468 aaKnown RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 NUS1Q96E22 293 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 CPNE1Q99829 537 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 RIOK2Q9BVS4 552 aaKnown RBP26.93■■□□□ 1.9
SSBP4-202ENST00000348495 CYP8B1Q9UNU6 501 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 A0A0C4DFX4 3053 aa26.93■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3DA0A087WVF3 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3IA0A087WXS9 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3EA0A087X179 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3KA0A087X1G2 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 A0A1W2PQU0 124 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3FA6NER0 549 aaPredicted RBP26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3LB9A6J9 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 RASGRF2O14827 1237 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3HP0C7X1 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 CA5AP35218 305 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 MSH2P43246 934 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 FGL2Q14314 439 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 ZRANB3Q5FWF4 1079 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 CEP85LQ5SZL2 805 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3GQ6DHY5 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3CQ6IPX1 549 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TBC1D3Q8IZP1 549 aaPredicted RBP26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TRAM1L1Q8N609 369 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 PNPLA1Q8N8W4 532 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 ZNF398Q8TD17 642 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 AP2M1Q96CW1 435 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 MRRFQ96E11 262 aaKnown RBP26.92■■□□□ 1.9
SSBP4-202ENST00000348495 TPSD1Q9BZJ3 242 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 FAM96AQ9H5X1 160 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 ASB8Q9H765 288 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 KCTD5Q9NXV2 234 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 ZNF180Q9UJW8 692 aa26.92■■□□□ 1.9
SSBP4-202ENST00000348495 FAM155BO75949 473 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 F7P08709 466 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-202ENST00000348495 ITGALP20701 1170 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 GABRB3P28472 473 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 HOXA6P31267 233 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 SLCO1A2P46721 670 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 PXNP49023 591 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-202ENST00000348495 PPP2CBP62714 309 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 PPP2CAP67775 309 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 ZNF284Q2VY69 593 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 GPR33Q49SQ1 333 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 ADGRD1Q6QNK2 874 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 LDB1Q86U70 411 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-202ENST00000348495 TRIM69Q86WT6 500 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 ZSCAN5AQ9BUG6 496 aa26.91■■□□□ 1.9
SSBP4-202ENST00000348495 WSB2Q9NYS7 404 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-202ENST00000348495 LRRC72A6NJI9 287 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 SEMA4FO95754 770 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 S1PR4O95977 384 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 UGT1A6P19224 532 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 UGT1A1P22309 533 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 UGT1A4P22310 534 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 UGT1A3P35503 534 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 UGT1A5P35504 534 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 MPP1Q00013 466 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 ATP13A5Q4VNC0 1218 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 PACS1Q6VY07 963 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 STRA8Q7Z7C7 330 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 SPATA16Q9BXB7 569 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 PRMT8Q9NR22 394 aaPredicted RBP26.9■■□□□ 1.9
SSBP4-202ENST00000348495 SPATA6Q9NWH7 488 aaPredicted RBP26.9■■□□□ 1.9
SSBP4-202ENST00000348495 SMOXQ9NWM0 555 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 PRR23AA6NEV1 266 aa26.9■■□□□ 1.9
SSBP4-202ENST00000348495 CDH16O75309 829 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms