RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 CHUKO15111 745 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 COL6A2P12110 1019 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 TYRP14679 529 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 NUDT2P50583 147 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 ZNF140P52738 457 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 RAD51Q06609 339 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 ZRSR2Q15696 482 aaKnown RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 PITRM1Q5JRX3 1037 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 LINGO1Q96FE5 620 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 LENG8Q96PV6 779 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 TUBB6Q9BUF5 446 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 SNX2O60749 519 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 MTX2O75431 263 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 VIPR2P41587 438 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 OR4D1Q15615 310 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 TCHHL1Q5QJ38 904 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 RFLNAQ6ZTI6 216 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 FRA10AC1Q70Z53 315 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 TMEM151AQ8N4L1 468 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 ATP6V1E2Q96A05 226 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 AARSD1Q9BTE6 412 aaKnown RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 ATP13A3Q9H7F0 1226 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 DOCK4Q8N1I0 1966 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 ZNF37AP17032 561 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 XPAP23025 273 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 SERPINA4P29622 427 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 C6orf163Q5TEZ5 329 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 ISCA2Q86U28 154 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 KLHDC8BQ8IXV7 354 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 DEFB107AQ8IZN7 70 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 USP13Q92995 863 aaPredicted RBP17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 KCNA7Q96RP8 456 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 TTC1Q99614 292 aa17.1■□□□□ 0.33
SMARCC2-202ENST00000347471 TMEM114B3SHH9 223 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 GIPC1O14908 333 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 PYGLP06737 847 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 SOX11P35716 441 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 ECT2LQ008S8 904 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 CREMQ03060 361 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 PPP1R3AQ16821 1122 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 C5orf22Q49AR2 442 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 DPY19L3Q6ZPD9 716 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 CHST14Q8NCH0 376 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 CLPBQ9H078 707 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 TNFRSF12AQ9NP84 129 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 TIMM22Q9Y584 194 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 LILRB3O75022 631 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 SORBS2O94875 1100 aaKnown RBP17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 HNF1BP35680 557 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 CREB5Q02930 508 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 PIWIL4Q7Z3Z4 852 aaKnown RBP17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 EEF1AKMT1Q8WVE0 214 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 PBXIP1Q96AQ6 731 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 EGFL8Q99944 293 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 MCMBPQ9BTE3 642 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 SLC25A13Q9UJS0 675 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 AGTR2P50052 363 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 CCNHP51946 323 aaPredicted RBP17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 FBXO39Q8N4B4 442 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 HSFX1Q9UBD0 423 aa17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 NKX1-2Q9UD57 310 aaPredicted RBP17.09■□□□□ 0.33
SMARCC2-202ENST00000347471 TPBGLP0DKB5 382 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 ACAP2Q15057 778 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 RBBP7Q16576 425 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 KIF19Q2TAC6 998 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 MMEL1Q495T6 779 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 LILRA6Q6PI73 481 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 SERPINA9Q86WD7 417 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 LSMEM2Q8N112 164 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 ARHGAP24Q8N264 748 aa17.08■□□□□ 0.33
SMARCC2-202ENST00000347471 LINC01553A4QN01 128 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 GREM1O60565 184 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 KRT36O76013 467 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 PGLSO95336 258 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 AKT1P31749 480 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 KHDC1Q4VXA5 237 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 AFAP1L2Q8N4X5 818 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 OR2AP1Q8NGE2 309 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 CCDC106Q9BWC9 280 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 CCDC167Q9P0B6 97 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 PATJQ8NI35 1801 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 MATN2O00339 956 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 GM2AP17900 193 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 EEF1DP29692 281 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 TTPAP49638 278 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 SNRPD1P62314 119 aaKnown RBP17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 INO80DQ53TQ3 878 aaPredicted RBP17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 Q6ZNB5 142 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 ACDQ96AP0 544 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 EID2BQ96D98 161 aa17.08■□□□□ 0.32
SMARCC2-202ENST00000347471 FBRSL1Q9HCM7 1045 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms