RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FZD2Q14332 565 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 TPSAB1Q15661 275 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 FAM153CQ494X1 144 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 LIPIQ6XZB0 460 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 USP45Q70EL2 814 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 HOOK3Q86VS8 718 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 DCP2Q8IU60 420 aaKnown RBP13.78□□□□□ -0.2
TPM4-202ENST00000344824 RBFAQ8N0V3 343 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 LPCAT1Q8NF37 534 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 FSD1LQ9BXM9 530 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 FAM153AQ9UHL3 310 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 CHKBQ9Y259 395 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 AAR2Q9Y312 384 aaKnown RBP13.78□□□□□ -0.2
TPM4-202ENST00000344824 MYLKQ15746 1914 aa13.78□□□□□ -0.2
TPM4-202ENST00000344824 AKAP13Q12802 2813 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 SCAMP1O15126 338 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 BANF1O75531 89 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 PIAS2O75928 621 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 LDOC1O95751 146 aaPredicted RBP13.77□□□□□ -0.21
TPM4-202ENST00000344824 AP2A1O95782 977 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 AGTP01019 485 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 TUBBP07437 444 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 PDHA1P08559 390 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 JUNDP17535 347 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 RXRGP48443 463 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 WNT3AP56704 352 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 PFN3P60673 137 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 DAB2P98082 770 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 DNAJC3Q13217 504 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 PTK2BQ14289 1009 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 IHHQ14623 411 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 PTPRRQ15256 657 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 CNGA3Q16281 694 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 WSCD2Q2TBF2 565 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 KDELC1Q6UW63 502 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 NDUFAF2Q8N183 169 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 CHCHD4Q8N4Q1 142 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 SLC25A41Q8N5S1 370 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 CENPTQ96BT3 561 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 NUS1Q96E22 293 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 PPP1R2P1Q96PQ5 205 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 SMIM14Q96QK8 99 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 TBL1YQ9BQ87 522 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 SCNM1Q9BWG6 230 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 TDRD1Q9BXT4 1180 aaKnown RBP13.77□□□□□ -0.21
TPM4-202ENST00000344824 LRRC40Q9H9A6 602 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 EIF2B3Q9NR50 452 aaKnown RBP13.77□□□□□ -0.21
TPM4-202ENST00000344824 APOBEC3BQ9UH17 382 aaKnown RBP13.77□□□□□ -0.21
TPM4-202ENST00000344824 OR1A2Q9Y585 309 aa13.77□□□□□ -0.21
TPM4-202ENST00000344824 SPEGQ15772 3267 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 A0A0U1RQS6 177 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 NPIPB15A6NHN6 443 aaPredicted RBP13.76□□□□□ -0.21
TPM4-202ENST00000344824 PSMD3O43242 534 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 TNFSF14O43557 240 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 AVILO75366 819 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 SLC4A1P02730 911 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 DGKAP23743 735 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 MAGEA6P43360 314 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 TNNT3P45378 269 aaPredicted RBP13.76□□□□□ -0.21
TPM4-202ENST00000344824 ARL4CP56559 192 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 HNRNPKP61978 463 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM4-202ENST00000344824 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
TPM4-202ENST00000344824 MPP3Q13368 585 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 INPP5AQ14642 412 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 BBS9Q3SYG4 887 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 HP1BP3Q5SSJ5 553 aaPredicted RBP13.76□□□□□ -0.21
TPM4-202ENST00000344824 FNBP1LQ5T0N5 605 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 KCTD11Q693B1 232 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 ALG1LQ6GMV1 187 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 MACC1Q6ZN28 852 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 DBX2Q6ZNG2 339 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 RD3Q7Z3Z2 195 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 DNAAF3Q8N9W5 541 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 PLA2G15Q8NCC3 412 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 LMX1AQ8TE12 382 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 IFT43Q96FT9 208 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 MRGPRX2Q96LB1 330 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 SUDS3Q9H7L9 328 aaPredicted RBP13.76□□□□□ -0.21
TPM4-202ENST00000344824 CD84Q9UIB8 345 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 MOSPD1Q9UJG1 213 aa13.76□□□□□ -0.21
TPM4-202ENST00000344824 ZFC3H1O60293 1989 aaKnown RBP13.76□□□□□ -0.21
TPM4-202ENST00000344824 PLXNB3Q9ULL4 1909 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 SCN8AQ9UQD0 1980 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 ERLIN1O75477 346 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 TRIM16O95361 564 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 ALPPL2P10696 532 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 LHCGRP22888 699 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 CES1P23141 567 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 HTR1BP28222 390 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 CHRNA4P43681 627 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 SESN2P58004 480 aaPredicted RBP13.75□□□□□ -0.21
TPM4-202ENST00000344824 YPEL5P62699 121 aa13.75□□□□□ -0.21
TPM4-202ENST00000344824 EIF2B5Q13144 721 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms