RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 BRAT1Q6PJG6 821 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 CRELD2Q6UXH1 353 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 MTDHQ86UE4 582 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 P3H2Q8IVL5 708 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 OR52K2Q8NGK3 314 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 SPATA22Q8NHS9 363 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 PCDH19Q8TAB3 1148 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 PRICKLE1Q96MT3 831 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 PTPRHQ9HD43 1115 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.35■□□□□ 0.212e-6■□□□□ 11.2
SMARCA4-201ENST00000344626 IGSF9Q9P2J2 1179 aa16.35■□□□□ 0.21
SMARCA4-201ENST00000344626 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 NAGLUP54802 743 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 RALGPS1Q5JS13 557 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 SH3PXD2AQ5TCZ1 1133 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 B4GALNT2Q8NHY0 566 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 FAM3CQ92520 227 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 SLC25A23Q9BV35 468 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 OSBPL6Q9BZF3 934 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 CAAP1Q9H8G2 361 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 SPHK2Q9NRA0 654 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 CROTQ9UKG9 612 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 COL6A2P12110 1019 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 TARSP26639 723 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 TMEM164Q5U3C3 297 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 MRPL10Q7Z7H8 261 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 CFAP206Q8IYR0 622 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 DTX3LQ8TDB6 740 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 KCNV2Q8TDN2 545 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 ACE2Q9BYF1 805 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 SCN3BQ9NY72 215 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 MYH3P11055 1940 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 ARCQ7LC44 396 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 TMPRSS6Q8IU80 811 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 DACH2Q96NX9 599 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 PIGVQ9NUD9 493 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 BANF1O75531 89 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 RPIAP49247 311 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 MLLT6P55198 1093 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 TSTD2Q5T7W7 516 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 HECTD2Q5U5R9 776 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 ESRP1Q6NXG1 681 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 DRICH1Q6PGQ1 229 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 CYGBQ8WWM9 190 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 SPATS2LQ9NUQ6 558 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 TMEM216Q9P0N5 145 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 R3HDM2Q9Y2K5 976 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 KNTC1P50748 2209 aa16.34■□□□□ 0.21
SMARCA4-201ENST00000344626 NUDT14O95848 222 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 TMEM240Q5SV17 173 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 R3HCC1LQ7Z5L2 792 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 LRRC57Q8N9N7 239 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 HCFC1R1Q9NWW0 138 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 CXXC1Q9P0U4 656 aaPredicted RBP16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 C2orf78A6NCI8 922 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 HAS3O00219 553 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 EPN2O95208 641 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 MYBL2P10244 700 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 PON2Q15165 354 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 IMPAD1Q9NX62 359 aa16.33■□□□□ 0.21
SMARCA4-201ENST00000344626 FCGR1AP12314 374 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 HGFP14210 728 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 PXNP49023 591 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 TRIP10Q15642 601 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF621Q6ZSS3 439 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 NUS1Q96E22 293 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 CDH19Q9H159 772 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 WDR26Q9H7D7 661 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 ADPRHL2Q9NX46 363 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 ZDHHC7Q9NXF8 308 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 DTLQ9NZJ0 730 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 HCN4Q9Y3Q4 1203 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 TPRP12270 2363 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 MYH1P12882 1939 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 B4DGG1 531 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 WNT9AO14904 365 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 BIRC5O15392 142 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 TRPC1P48995 793 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 DSG1Q02413 1049 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 PPIDQ08752 370 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 KRT73Q86Y46 540 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 MREGQ8N565 214 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 DTNBP1Q96EV8 351 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 FCRL5Q96RD9 977 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 SUFUQ9UMX1 484 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 HS3ST4Q9Y661 456 aa16.33■□□□□ 0.2
SMARCA4-201ENST00000344626 ITGAXP20702 1163 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CMPK1P30085 196 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 GRIA4P48058 902 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 LIPMQ5VYY2 423 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 ZCCHC23Q6ZST2 131 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 TBATAQ96M53 351 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 CEP295NLQ96MC4 621 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 LMAN1LQ9HAT1 526 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 FAM170BA6NMN3 283 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 OCA2Q04671 838 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 MARCH8Q5T0T0 291 aa16.32■□□□□ 0.2
SMARCA4-201ENST00000344626 MPP5Q8N3R9 675 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms