RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CHST14Q8NCH0 376 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 SLC7A6OSQ96CW6 309 aaPredicted RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 ECHDC3Q96DC8 303 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 CCDC126Q96EE4 140 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 PTCD3Q96EY7 689 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 LRMDAQ9H2I8 198 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 COG4Q9H9E3 785 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 A8MX80 341 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 F8W8V4 182 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 GAPDHSO14556 408 aaPredicted RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 CYP17A1P05093 508 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 SERPINA6P08185 405 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 RPL14P50914 215 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 PRKAA1Q13131 559 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 GEN1Q17RS7 908 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 CFAP157Q5JU67 520 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 TRIM68Q6AZZ1 485 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 EPGNQ6UW88 154 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 TSPAN33Q86UF1 283 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 GDPD5Q8WTR4 605 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 INPP5DQ92835 1189 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 GPR21Q99679 349 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 SHCBP1LQ9BZQ2 653 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 NKX2-4Q9H2Z4 354 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 SYTL2Q9HCH5 934 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 GALPQ9UBC7 116 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 ZDHHC2Q9UIJ5 367 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 LNPEPQ9UIQ6 1025 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 APOBEC2Q9Y235 224 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 OAS3Q9Y6K5 1087 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 PDE4DIPQ5VU43 2346 aa19.89■□□□□ 0.78
RTN1-202ENST00000342503 NPIPB15A6NHN6 443 aaPredicted RBP19.89■□□□□ 0.77
RTN1-202ENST00000342503 H3BMM5 538 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 DIAPH2O60879 1101 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 IPO13O94829 963 aaKnown RBP19.89■□□□□ 0.77
RTN1-202ENST00000342503 PAPLNO95428 1278 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 WEE1P30291 646 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 PTGER3P43115 390 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 SEMG2Q02383 582 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 RAD51Q06609 339 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 TCEAL5Q5H9L2 206 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 CRTC1Q6UUV9 634 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 PIWIL4Q7Z3Z4 852 aaKnown RBP19.89■□□□□ 0.77
RTN1-202ENST00000342503 CYB5D2Q8WUJ1 264 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 OSCP1Q8WVF1 389 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 SORCS1Q8WY21 1168 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 MRGPRX3Q96LB0 322 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 LYSMD1Q96S90 227 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 C19orf43Q9BQ61 176 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 CCDC106Q9BWC9 280 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 SFXN1Q9H9B4 322 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 NCKIPSDQ9NZQ3 722 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 FBXO10Q9UK96 956 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 PPIL1Q9Y3C6 166 aa19.89■□□□□ 0.77
RTN1-202ENST00000342503 CAPN14A8MX76 684 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 NIPSNAP2O75323 286 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 VPS26AO75436 327 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 PRAMEF1O95521 474 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 UGT2B4P06133 528 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 PYGLP06737 847 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 KRT16P08779 473 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 ADH5P11766 374 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 BPIP17213 487 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 CA5AP35218 305 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 RASSF2P50749 326 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 ELF3P78545 371 aaPredicted RBP19.88■□□□□ 0.77
RTN1-202ENST00000342503 OR4D1Q15615 310 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 EML3Q32P44 896 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 TREML1Q86YW5 311 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SLC22A9Q8IVM8 553 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 STK40Q8N2I9 435 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 MAPK15Q8TD08 544 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.88■□□□□ 0.77
RTN1-202ENST00000342503 PHF21BQ96EK2 531 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SCRN2Q96FV2 425 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 CNDP1Q96KN2 507 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 ZNF641Q96N77 438 aaPredicted RBP19.88■□□□□ 0.77
RTN1-202ENST00000342503 SLC30A3Q99726 388 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 PBX4Q9BYU1 374 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 P2RY12Q9H244 342 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 WASH3PC4AMC7 463 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 MATN2O00339 956 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 HNRNPCL1O60812 293 aaKnown RBP19.88■□□□□ 0.77
RTN1-202ENST00000342503 CISD3P0C7P0 127 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SERPINB5P36952 375 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 HK2P52789 917 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 KCNC3Q14003 757 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SLC9B1Q4ZJI4 515 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 FAM78AQ5JUQ0 283 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 TPRG1Q6ZUI0 275 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SNX20Q7Z614 316 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SERPINA9Q86WD7 417 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 NPAS3Q8IXF0 933 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 SIDT2Q8NBJ9 832 aaKnown RBP19.88■□□□□ 0.77
RTN1-202ENST00000342503 OR2A12Q8NGT7 310 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 GRIN3AQ8TCU5 1115 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 DERL2Q9GZP9 239 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 LMAN2LQ9H0V9 348 aa19.88■□□□□ 0.77
RTN1-202ENST00000342503 TFB2MQ9H5Q4 396 aaKnown RBP19.88■□□□□ 0.77
RTN1-202ENST00000342503 ASB8Q9H765 288 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms