RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 RP9Q8TA86 221 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 ADAM32Q8TC27 787 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 SEPT8Q92599 483 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 HDAC2Q92769 488 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 TMEM176AQ96HP8 235 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 REXO5Q96IC2 774 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 DMRTB1Q96MA1 342 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 LPIN3Q9BQK8 851 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 TTYH2Q9BSA4 534 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
RTN3-203ENST00000341307 XPO7Q9UIA9 1087 aaKnown RBP11.84□□□□□ -0.51
RTN3-203ENST00000341307 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 RRN3P2A6NIE6 340 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 M0QYV0 167 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 AVILO75366 819 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 MICAL2O94851 1124 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 PSEN2P49810 448 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 RAD51Q06609 339 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 INTS11Q5TA45 600 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 CCDC103Q8IW40 242 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 PDIK1LQ8N165 341 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 ANKRD53Q8N9V6 530 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 RHOXF1Q8NHV9 184 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 PPWD1Q96BP3 646 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 CNDP1Q96KN2 507 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 MIR1-1HGQ9H1L0 117 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 SOX17Q9H6I2 414 aaPredicted RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 LRRC40Q9H9A6 602 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 SMYD2Q9NRG4 433 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 IP6K2Q9UHH9 426 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 MBLAC1A4D2B0 266 aaPredicted RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 FAM25AB3EWG3 89 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 FAM25CB3EWG5 89 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 FAM25GB3EWG6 89 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 E7ENX8 843 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 PDPK1O15530 556 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 SERPINE1P05121 402 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 DARSP14868 501 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 IMPDH1P20839 514 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 MAGP20916 626 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 GRK4P32298 578 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 GABRB2P47870 512 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 RFTN1Q14699 578 aaPredicted RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 PCLAFQ15004 111 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 ACAP2Q15057 778 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 PLCL1Q15111 1095 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 GEN1Q17RS7 908 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 SMTNL2Q2TAL5 461 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 CCNYL2Q5T2Q4 361 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 TMEM236Q5W0B7 351 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 SLC27A1Q6PCB7 646 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 MFSD7Q6UXD7 560 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 LINC00523Q86TU6 105 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 CAMK1DQ8IU85 385 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 NKD2Q969F2 451 aaPredicted RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 SLITRK1Q96PX8 696 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 GON7Q9BXV9 100 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 YTHDF1Q9BYJ9 559 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 DPEP3Q9H4B8 488 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 FARSBQ9NSD9 589 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
RTN3-203ENST00000341307 NME7Q9Y5B8 376 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 TEX264Q9Y6I9 313 aa11.83□□□□□ -0.52
RTN3-203ENST00000341307 CITO14578 2027 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 LAMA3Q16787 3333 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 A8MV72 311 aaPredicted RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 BET1O15155 118 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 OR7A10O76100 309 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 SLITRK5O94991 958 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 GOT2P00505 430 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 RPL17P18621 184 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 CYP3A5P20815 502 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 GSTM2P28161 218 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ELK4P28324 431 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 HTR3AP46098 478 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 YWHAEP62258 255 aaKnown RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 RBP5P82980 135 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 FPGSQ05932 587 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 POLD3Q15054 466 aaPredicted RBP11.82□□□□□ -0.52
RTN3-203ENST00000341307 KCNT1Q5JUK3 1230 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 FAM171BQ6P995 826 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 CYP2R1Q6VVX0 501 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ERMP1Q7Z2K6 904 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 SLC22A15Q8IZD6 547 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 EID3Q8N140 333 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 PIK3C3Q8NEB9 887 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 LPGAT1Q92604 370 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 NRBF2Q96F24 287 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 SERHL2Q9H4I8 314 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 NPAP1Q9NZP6 1156 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ACTR3BQ9P1U1 418 aa11.82□□□□□ -0.52
RTN3-203ENST00000341307 ZNF236Q9UL36 1845 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms