RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KCNJ11Q14654 390 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 NFATC4Q14934 902 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 CHRNA6Q15825 494 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 HP1BP3Q5SSJ5 553 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 LINC00523Q86TU6 105 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 CBARPQ8N350 705 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 SETD7Q8WTS6 366 aaKnown RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 PWWP2AQ96N64 755 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 ELF4Q99607 663 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 CYP4F12Q9HCS2 524 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 TM7SF3Q9NS93 570 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 KLQ9UEF7 1012 aa13.14□□□□□ -0.31
TUBD1-202ENST00000340993 OAS3Q9Y6K5 1087 aaKnown RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 ZFC3H1O60293 1989 aaKnown RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 ARHGEF17Q96PE2 2063 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-202ENST00000340993 RAD51CO43502 376 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 TSHRP16473 764 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 JUNDP17535 347 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 LPOP22079 712 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 GNPDA1P46926 289 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 PTK6Q13882 451 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 SHBQ15464 509 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 TAF1AQ15573 450 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 RSPO4Q2I0M5 234 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 PLA2G4EQ3MJ16 856 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 CCDC157Q569K6 752 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 DNTTIP2Q5QJE6 756 aaKnown RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 HENMT1Q5T8I9 393 aaKnown RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 CASC4Q6P4E1 433 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 ZNF534Q76KX8 674 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 PARGQ86W56 976 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 BRSK1Q8TDC3 778 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 ASB12Q8WXK4 309 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 OR1E3Q8WZA6 343 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 FGF22Q9HCT0 170 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 IL26Q9NPH9 171 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 PHPT1Q9NRX4 125 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 SYBUQ9NX95 663 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 HACD3Q9P035 362 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 IL17CQ9P0M4 197 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 PCYOX1Q9UHG3 505 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 BTBD3Q9Y2F9 522 aa13.13□□□□□ -0.31
TUBD1-202ENST00000340993 ZNF106Q9H2Y7 1883 aaKnown RBP13.13□□□□□ -0.31
TUBD1-202ENST00000340993 GLYATL1P3A0A0U1RQE8 302 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SPTY2D1-AS1A0A0U1RR47 76 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CCDC188H7C350 402 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 LDB2O43679 373 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SUN1O94901 812 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CRTAMO95727 393 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 MYF5P13349 255 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 HTR1BP28222 390 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 HMGCLP35914 325 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SPAM1P38567 509 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CCT8P50990 548 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 ZNF140P52738 457 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 MSLNQ13421 630 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 PRRT3Q5FWE3 981 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 IL27RAQ6UWB1 636 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 MACC1Q6ZN28 852 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 IQCHQ86VS3 1027 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 KLHDC8BQ8IXV7 354 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 WDR92Q96MX6 357 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 TRABDQ9H4I3 376 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CASS4Q9NQ75 786 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CHRAC1Q9NRG0 131 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 IL1RAPL1Q9NZN1 696 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 RNF14Q9UBS8 474 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 APOBEC3BQ9UH17 382 aaKnown RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 FEZ2Q9UHY8 353 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 PCYT1BQ9Y5K3 369 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 ERI2A8K979 691 aaKnown RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 EFCAB8A8MWE9 144 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SH3BP5O60239 455 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SLC25A14O95258 325 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 PRAMEF1O95521 474 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 F7P08709 466 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 ARRB1P49407 418 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CDKN1CP49918 316 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 ARSDP51689 593 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 SRP54P61011 504 aaKnown RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 PPARDQ03181 441 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 AGERQ15109 404 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 KHDC1Q4VXA5 237 aaKnown RBP13.12□□□□□ -0.31
TUBD1-202ENST00000340993 ZRANB3Q5FWF4 1079 aa13.12□□□□□ -0.31
TUBD1-202ENST00000340993 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms