RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 IL1R2P27930 398 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 DSC2Q02487 901 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 TRAP1Q12931 704 aaKnown RBP13.71□□□□□ -0.21
RTN4-202ENST00000337526 LCP2Q13094 533 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 LPIN1Q14693 890 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 ZNF846Q147U1 533 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 TARBP2Q15633 366 aaKnown RBP13.71□□□□□ -0.21
RTN4-202ENST00000337526 FNDC3BQ53EP0 1204 aaKnown RBP13.71□□□□□ -0.21
RTN4-202ENST00000337526 CWF19L1Q69YN2 538 aaKnown RBP13.71□□□□□ -0.21
RTN4-202ENST00000337526 ZNF671Q8TAW3 534 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 SPPL2BQ8TCT7 592 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 SUSD6Q92537 303 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 APOLD1Q96LR9 279 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 E9PAM4 449 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 OR4Q2P0C623 313 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 CLCQ05315 142 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 DUSP4Q13115 394 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 MED22Q15528 200 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 ZSWIM7Q19AV6 140 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 POM121L1PQ3SYA9 428 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 PARP15Q460N3 678 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 IL23RQ5VWK5 629 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 SLC9A7Q96T83 725 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 EBF3Q9H4W6 596 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 FANCEQ9HB96 536 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 ITGB1BP2Q9UKP3 347 aa13.71□□□□□ -0.21
RTN4-202ENST00000337526 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
RTN4-202ENST00000337526 OR6C75A6NL08 312 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 MATN3O15232 486 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 OR6B1O95007 311 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 PPIBP23284 216 aaKnown RBP13.71□□□□□ -0.22
RTN4-202ENST00000337526 MTHFRP42898 656 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 RPS9P46781 194 aaKnown RBP13.71□□□□□ -0.22
RTN4-202ENST00000337526 SMIM11AP58511 58 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 SPIBQ01892 262 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 METTL3Q86U44 580 aaKnown RBP13.71□□□□□ -0.22
RTN4-202ENST00000337526 STYXQ8WUJ0 223 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 HEXDCQ8WVB3 486 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 CENPNQ96H22 339 aaPredicted RBP13.71□□□□□ -0.22
RTN4-202ENST00000337526 FAXDC2Q96IV6 333 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 MAGEB10Q96LZ2 347 aaPredicted RBP13.71□□□□□ -0.22
RTN4-202ENST00000337526 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 GALNT8Q9NY28 637 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 VPS4AQ9UN37 437 aa13.71□□□□□ -0.22
RTN4-202ENST00000337526 MRPS7Q9Y2R9 242 aaKnown RBP13.71□□□□□ -0.22
RTN4-202ENST00000337526 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 HOXB6P17509 224 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 SLC5A3P53794 718 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 LRTOMTQ8WZ04 291 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 TDRD1Q9BXT4 1180 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 FZD8Q9H461 694 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 ALG2Q9H553 416 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 TOR4AQ9NXH8 423 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 ZNF490Q9ULM2 529 aaPredicted RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 TCRBV7S3A2A0A539 114 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 TREHO43280 583 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 XYLBO75191 536 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 MMP3P08254 477 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 UMPSP11172 480 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 TCF4P15884 667 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 KIR3DL1P43629 444 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 ASPAP45381 313 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 SLC18A1P54219 525 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 GNA13Q14344 377 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 MZT2BQ6NZ67 158 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 CLP1Q92989 425 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 PCED1BQ96HM7 432 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 HBEGFQ99075 208 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 FTHL17Q9BXU8 183 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 ZFYVE1Q9HBF4 777 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 ZNF358Q9NW07 568 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 IGSF9Q9P2J2 1179 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 KLRG2A4D1S0 409 aaPredicted RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 SLC25A14O95258 325 aaPredicted RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 GPIP06744 558 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 LMO2P25791 158 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 AQP1P29972 269 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 OR1D2P34982 312 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 SRP54P61011 504 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 ZNF460Q14592 562 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 USP41Q3LFD5 358 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 CRTC3Q6UUV7 619 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 UBE2R2Q712K3 238 aaPredicted RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 SLCO6A1Q86UG4 719 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 COQ7Q99807 217 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 SPATA5L1Q9BVQ7 753 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 BRD9Q9H8M2 597 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 EIF2B3Q9NR50 452 aaKnown RBP13.7□□□□□ -0.22
RTN4-202ENST00000337526 RASSF1Q9NS23 344 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 TMEM39AQ9NV64 488 aa13.7□□□□□ -0.22
RTN4-202ENST00000337526 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms