RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GALNT12Q8IXK2 581 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 LRRC4CQ9HCJ2 640 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 C11orf16Q9NQ32 467 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 TAS2R7Q9NYW3 318 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SMCO3A2RU48 225 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 M0QX08 132 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 NOBOXO60393 691 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SLC25A12O75746 678 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 HOXB6P17509 224 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 STXBP1P61764 594 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 DLG1Q12959 904 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 OGFRL1Q5TC84 451 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 RETSATQ6NUM9 610 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 FAM183BPQ6ZVS7 135 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 OR52J3Q8NH60 311 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 RNF31Q96EP0 1072 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 KLHL5Q96PQ7 755 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 MAN2B2Q9Y2E5 1009 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 A0A088AWK7 358 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PRAMEF1O95521 474 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF10P21506 573 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PRDX6P30041 224 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 RPL9P32969 192 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 GRK5P34947 590 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 CPT1AP50416 773 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 CSTF1Q05048 431 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 NTRK3Q16288 839 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 INSCQ1MX18 579 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 GNASQ5JWF2 1037 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 RAB12Q6IQ22 244 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ARMC10Q8N2F6 343 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 MAB21L3Q8N8X9 362 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 UBE2E3Q969T4 207 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SERPINB11Q96P15 392 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 RNF157Q96PX1 679 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 PARK7Q99497 189 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 FDXACB1Q9BRP7 624 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 KLHL33A6NCF5 533 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 FAM86C2PA6NEL3 165 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 REM1O75628 298 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 DBIP07108 87 aaKnown RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 FMO3P31513 532 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ICAM3P32942 547 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 CPSF6Q16630 551 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 CHST15Q7LFX5 561 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-201ENST00000334504 COLGALT2Q8IYK4 626 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF567Q8N184 647 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 C7orf26Q96N11 449 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ALG2Q9H553 416 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 ASB8Q9H765 288 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 POPDC2Q9HBU9 364 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 SETD4Q9NVD3 440 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 IKZF2Q9UKS7 526 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 EDARQ9UNE0 448 aa9.78□□□□□ -0.84
COL4A6-201ENST00000334504 GPR182O15218 404 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 PAPSS1O43252 624 aaPredicted RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 CABYRO75952 493 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 OR7A10O76100 309 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 SLC25A27O95847 323 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 CATP04040 527 aaKnown RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 PPIBP23284 216 aaKnown RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 TLX1P31314 330 aaPredicted RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 ABL2P42684 1182 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 PITPNAQ00169 270 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 NOL9Q5SY16 702 aaKnown RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 HHIPL2Q6UWX4 724 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 ZNF730Q6ZMV8 503 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 CCDC28AQ8IWP9 274 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 SYNPOQ8N3V7 929 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 DRAXINQ8NBI3 349 aaPredicted RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 ERVK-5Q9HDB9 667 aa9.77□□□□□ -0.84
COL4A6-201ENST00000334504 RABL2AQ9UBK7 228 aaPredicted RBP9.77□□□□□ -0.84
COL4A6-201ENST00000334504 MAP3K4Q9Y6R4 1608 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 RSL1D1O76021 490 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CHRM5P08912 532 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 MSL3P1P0C860 447 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 GSTT2BP0CG30 244 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CLUP10909 449 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CKBP12277 381 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SLC12A3P55017 1021 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PLD1Q13393 1074 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 GARNL3Q5VVW2 1013 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 USP30Q70CQ3 517 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 RIOX2Q8IUF8 465 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 TRAPPC5Q8IUR0 188 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 OR2L5Q8NG80 312 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 DNAJA4Q8WW22 397 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 ZFP3Q96NJ6 502 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 GPER1Q99527 375 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 SNRNP25Q9BV90 132 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 NXF3Q9H4D5 531 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PAK6Q9NQU5 681 aaPredicted RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 PSME2Q9UL46 239 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 CNOT6Q9ULM6 557 aaKnown RBP9.77□□□□□ -0.85
COL4A6-201ENST00000334504 ELOVL7A1L3X0 281 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 NPEPPSL1A6NEC2 478 aa9.77□□□□□ -0.85
COL4A6-201ENST00000334504 LACTBL1A8MY62 500 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms