RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 SDR16C5Q8N3Y7 309 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RCN3Q96D15 328 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SIPA1Q96FS4 1042 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SLC30A2Q9BRI3 323 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MYNNQ9NPC7 610 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 MINPP1Q9UNW1 487 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CTDNEP1O95476 244 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 HNRNPFP52597 415 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 SSTP61278 116 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 RABL3Q5HYI8 236 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 LMBRD2Q68DH5 695 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 REP15Q6BDI9 236 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 HMBOX1Q6NT76 420 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 LLGL2Q6P1M3 1020 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CYP4V2Q6ZWL3 525 aaPredicted RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 STRADAQ7RTN6 431 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TSEN2Q8NCE0 465 aaKnown RBP5.51□□□□□ -1.53
PTPRB-202ENST00000334414 OR14K1Q8NGZ2 314 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 TM9SF2Q99805 663 aa5.51□□□□□ -1.53
PTPRB-202ENST00000334414 CHD2O14647 1828 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RSL1D1O76021 490 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 IGKV5-2P06315 115 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 DCDC1P59894 354 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CBFBQ13951 182 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 MFSD10Q14728 455 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 COL28A1Q2UY09 1125 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 KLHL36Q8N4N3 616 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PIGXQ8TBF5 258 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF350Q9GZX5 532 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 NELFAQ9H3P2 528 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RHOJQ9H4E5 214 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 NT5MQ9NPB1 228 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PCDHGB5Q9Y5G0 923 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ELOVL7A1L3X0 281 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PRORSD1PA6NEY8 169 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 WRBO00258 174 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 BPGMP07738 259 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TACSTD2P09758 323 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 FOXO4P98177 505 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 C4orf46Q504U0 113 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 KLHL26Q53HC5 615 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF311Q5JNZ3 666 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CBWD3Q5JTY5 395 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CBWD5Q5RIA9 395 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF613Q6PF04 617 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PIGWQ7Z7B1 504 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TOMM5Q8N4H5 51 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 GSTCDQ8NEC7 633 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 SELENOMQ8WWX9 145 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 C12orf43Q96C57 262 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PPP1R16BQ96T49 567 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 NDUFAF4Q9P032 175 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RGS17Q9UGC6 210 aaPredicted RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TCRBV9S1A1TA0A576 114 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RAB19A4D1S5 217 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 MCIDASD6RGH6 385 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PAPSS1O43252 624 aaPredicted RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ENTPD6O75354 484 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CCNB2O95067 398 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 PTPN5P54829 565 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TIGD6Q17RP2 521 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 WSCD2Q2TBF2 565 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RAB11FIP2Q7L804 512 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ALYREFQ86V81 257 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RBM15BQ8NDT2 890 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TSEN15Q8WW01 171 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 MAFIPQ8WZ33 124 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 HDAC2Q92769 488 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 EBNA1BP2Q99848 306 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ISCA1Q9BUE6 129 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CISHQ9NSE2 258 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ABCC13Q9NSE7 274 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 FKBP7Q9Y680 259 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CHD1O14646 1710 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 I3L521 148 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 MRPS14O60783 128 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TRIM3O75382 744 aaPredicted RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 IFNA1P01562 189 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 SLC1A2P43004 574 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 GPSM2P81274 684 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 SH3D19Q5HYK7 790 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ATG9AQ7Z3C6 839 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 GALNT12Q8IXK2 581 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 SLC34A3Q8N130 599 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TBCDQ9BTW9 1192 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 USP29Q9HBJ7 922 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TRIM36Q9NQ86 728 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ADGRE2Q9UHX3 823 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TRIM64A6NGJ6 449 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 TRIM64BA6NI03 449 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 H0YAE9 185 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 XKRYO14609 159 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 CATP04040 527 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 STAG3L1P0CL83 205 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ITGA3P26006 1051 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 RPL4P36578 427 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 LARS2Q15031 903 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 DALRD3Q5D0E6 543 aaKnown RBP5.5□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF280DQ6N043 979 aa5.5□□□□□ -1.53
PTPRB-202ENST00000334414 DUS1LQ6P1R4 473 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms