RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 BCO2Q9BYV7 579 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 RPF1Q9H9Y2 349 aaKnown RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 AKIP1Q9NQ31 210 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 TAF4O00268 1085 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 TNPO2O14787 897 aaKnown RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 MMP3P08254 477 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 NCK1P16333 377 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 ZNF157P51786 506 aaPredicted RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 NDST1P52848 882 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 GJA9P57773 515 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 GNG2P59768 71 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 AMHR2Q16671 573 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 CDONQ4KMG0 1287 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 PMF1Q6P1K2 205 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 TMEM135Q86UB9 458 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 RETREG3Q86VR2 466 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 CLEC4FQ8N1N0 589 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 CCDC185Q8N715 623 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 YME1L1Q96TA2 773 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 C8orf4Q9NR00 106 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 SIX4Q9UIU6 781 aa18.11■□□□□ 0.49
PKP3-201ENST00000331563 ARIH1Q9Y4X5 557 aaPredicted RBP18.11■□□□□ 0.49
PKP3-201ENST00000331563 ASNA1O43681 348 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 NPHS1O60500 1241 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 NADKO95544 446 aaPredicted RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 CYP3A5P20815 502 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 ALDH4A1P30038 563 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 ARL1P40616 181 aaPredicted RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 P2RX3P56373 397 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 BEX3Q00994 111 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SLC6A3Q01959 620 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 IL31Q6EBC2 164 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 LINC00523Q86TU6 105 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 RALGPS2Q86X27 583 aaPredicted RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 STON2Q8WXE9 905 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 ROPN1LQ96C74 230 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 PARK7Q99497 189 aaKnown RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 GPR22Q99680 433 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 LRRC4Q9HBW1 653 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 AASDHPPTQ9NRN7 309 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 ACTR3BQ9P1U1 418 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SNX5Q9Y5X3 404 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SIP14410 1827 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 TRIP11Q15643 1979 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SYNJ2BP-COX16A0A087WUM0 186 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 C16orf96A6NNT2 1141 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SYCE1LA8MT33 242 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 GAS2O43903 313 aaKnown RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 MAN1A2O60476 641 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 TMCC2O75069 709 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 HTR1BP28222 390 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SHMT2P34897 504 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 RFC2P35250 354 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 HADHAP40939 763 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 SLC13A2Q13183 592 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 FAM83EQ2M2I3 478 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 UBE2UQ5VVX9 321 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 ZC3HC1Q86WB0 502 aaKnown RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 SPARTQ8N0X7 666 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 LSMEM1Q8N8F7 131 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 OR7A2PQ8NGA2 310 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 PSMA8Q8TAA3 256 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 ATL1Q8WXF7 558 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 GLMNQ92990 594 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 TP53INP1Q96A56 240 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 PRDM12Q9H4Q4 367 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 COX16Q9P0S2 106 aa18.1■□□□□ 0.49
PKP3-201ENST00000331563 TRIP12Q14669 1992 aaPredicted RBP18.1■□□□□ 0.49
PKP3-201ENST00000331563 DPYSL4O14531 572 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 GFAPP14136 432 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 TNFAIP2Q03169 654 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 BNIP2Q12982 314 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 CRY1Q16526 586 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 DUSP28Q4G0W2 176 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 ZNF484Q5JVG2 852 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 TSTD2Q5T7W7 516 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 OSBPL2Q9H1P3 480 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 EML4Q9HC35 981 aaKnown RBP18.09■□□□□ 0.49
PKP3-201ENST00000331563 TNFRSF12AQ9NP84 129 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 LAMA3Q16787 3333 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 A0A0J9YYE9 177 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 PTGES3LE9PB15 166 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 GPIP06744 558 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 DDX5P17844 614 aaKnown RBP18.09■□□□□ 0.49
PKP3-201ENST00000331563 TSPAN8P19075 237 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 COPZ1P61923 177 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 ADARB1P78563 741 aaKnown RBP18.09■□□□□ 0.49
PKP3-201ENST00000331563 ECT2LQ008S8 904 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 SNX17Q15036 470 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 FAM110CQ1W6H9 321 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 CLEC6AQ6EIG7 209 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 TBPL2Q6SJ96 375 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 CUZD1Q86UP6 607 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 FAM131BQ86XD5 332 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 PHF21BQ96EK2 531 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 ABHD16BQ9H3Z7 469 aa18.09■□□□□ 0.49
PKP3-201ENST00000331563 RHOJQ9H4E5 214 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms