RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PDGFRAP16234 1089 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 CYP2F1P24903 491 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ERP29P30040 261 aaKnown RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 OXTRP30559 389 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 SRP54P61011 504 aaKnown RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 ISL1P61371 349 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 IRF9Q00978 393 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 TRAF3Q13114 568 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ZNF691Q5VV52 312 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 XRRA1Q6P2D8 792 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 GET4Q7L5D6 327 aaPredicted RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 ZBTB46Q86UZ6 589 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ZDHHC13Q8IUH4 622 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 FUNDC1Q8IVP5 155 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 DCP1BQ8IZD4 617 aaKnown RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 CACTIN-AS1Q8N1I8 211 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 EMC1Q8N766 993 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 OR52E4Q8NGH9 312 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 NDNFQ8TB73 568 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 MARK4Q96L34 752 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 DGCR6LQ9BY27 220 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ALG2Q9H553 416 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 RPRD1BQ9NQG5 326 aaKnown RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 DDX28Q9NUL7 540 aaKnown RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 CMTM6Q9NX76 183 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 CYTH4Q9UIA0 394 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 RUVBL2Q9Y230 463 aaKnown RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 PCDHGB2Q9Y5G2 931 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ZBBXA8MT70 800 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 FXYD1O00168 92 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 UPK1AO00322 258 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 PRKD3O94806 890 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 INMTO95050 263 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ITGAMP11215 1152 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 TPD52P55327 224 aaPredicted RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 ACTR2P61160 394 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 SEMA3BQ13214 749 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 MAPK11Q15759 364 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 DUOXA2Q1HG44 320 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 SMU1Q2TAY7 513 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 GDPD3Q7L5L3 318 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 C14orf80Q86SX3 495 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 NOXA1Q86UR1 476 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ZDHHC17Q8IUH5 632 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 CNTN4Q8IWV2 1026 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 MIER2Q8N344 545 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 BEND7Q8N7W2 519 aaPredicted RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 IPCEF1Q8WWN9 437 aaPredicted RBP8.36□□□□□ -1.07
SKA2-201ENST00000330137 RXFP2Q8WXD0 754 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 NCLNQ969V3 563 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 TMEM125Q96AQ2 219 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 ZHX1-C8orf76Q96EF9 292 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 RNF170Q96K19 258 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 SCYL1Q96KG9 808 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 GPR78Q96P69 363 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 KIFC1Q9BW19 673 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 NTN4Q9HB63 628 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 CASS4Q9NQ75 786 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 GGA3Q9NZ52 723 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 SLC17A6Q9P2U8 582 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 SLCO3A1Q9UIG8 710 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 PCDHB3Q9Y5E6 796 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 NRXN2Q9P2S2 1712 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 A0A0J9YYE9 177 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 A6NL46 340 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 TOR1BO14657 336 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 INPP4BO15327 924 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 B4GAT1O43505 415 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 BBOX1O75936 387 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 SLC35E2BP0CK96 405 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 SCNN1AP37088 669 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ASPAP45381 313 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ZNF135P52742 658 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 SESN2P58004 480 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 IGBP1P78318 339 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 GPR50Q13585 617 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 MTMR1Q13613 665 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 PRPSAP1Q14558 356 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 FAM98BQ52LJ0 330 aaKnown RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 TOR1AIP1Q5JTV8 583 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 CATSPEREQ5SY80 951 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 FAM102AQ5T9C2 384 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 PIK3R6Q5UE93 754 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ZPBP2Q6X784 338 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 LDHDQ86WU2 507 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 TMEM199Q8N511 208 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 PAF1Q8N7H5 531 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 FLCNQ8NFG4 579 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 OR5B17Q8NGF7 314 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 PPP1R36Q96LQ0 422 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 CEP295NLQ96MC4 621 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 FCRL3Q96P31 734 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 MSTO1Q9BUK6 570 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 IDI2Q9BXS1 227 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 ZNF717Q9BY31 904 aaPredicted RBP8.35□□□□□ -1.07
SKA2-201ENST00000330137 UGT2B28Q9BY64 529 aa8.35□□□□□ -1.07
SKA2-201ENST00000330137 POLE4Q9NR33 117 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms