RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CD68P34810 354 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ERVK-21P61565 698 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 SP140Q13342 867 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 KCNJ11Q14654 390 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ARHGEF16Q5VV41 709 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TLK2Q86UE8 772 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 MICU2Q8IYU8 434 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 CHCHD4Q8N4Q1 142 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 MAGEE2Q8TD90 523 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ZFPM2Q8WW38 1151 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 DUS3LQ96G46 650 aaKnown RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TWNKQ96RR1 684 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ZFP14Q9HCL3 533 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 MYOZ2Q9NPC6 264 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 NGRNQ9NPE2 291 aaKnown RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TMEM39AQ9NV64 488 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 DTLQ9NZJ0 730 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ADGRE2Q9UHX3 823 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PCOLCE2Q9UKZ9 415 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 SNX6Q9UNH7 406 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 CAPN5O15484 640 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PTP4A3O75365 173 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PPM1BO75688 479 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 RASAL1O95294 804 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 S100A6P06703 90 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 HOXD4P09016 255 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ARP10275 920 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 SLAMF1Q13291 335 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 RFTN1Q14699 578 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PCBP1Q15365 356 aaKnown RBP eCLIP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PLEKHG6Q3KR16 790 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TBCELQ5QJ74 424 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TREML2Q5T2D2 321 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 LRRC8EQ6NSJ5 796 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 TXNDC11Q6PKC3 985 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 CFAP77Q6ZQR2 320 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ANKS3Q6ZW76 656 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 STRADAQ7RTN6 431 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 PRSS42Q7Z5A4 293 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 BBS7Q8IWZ6 715 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 GPD1LQ8N335 351 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ST13P5Q8NFI4 369 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ZFAND1Q8TCF1 268 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 C9orf16Q9BUW7 83 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 SP110Q9HB58 689 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 RAVER2Q9HCJ3 691 aaKnown RBP11.82□□□□□ -0.52
SHMT2-201ENST00000328923 DPP3Q9NY33 737 aa11.82□□□□□ -0.52
SHMT2-201ENST00000328923 ARID2Q68CP9 1835 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 TCAF2A6NFQ2 919 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 F8VP50 259 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 NRP2O60462 931 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 PLA2G6O60733 806 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ADAM11O75078 769 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 NDUFS6O75380 124 aaKnown RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 APOA1P02647 267 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 CRHBPP24387 322 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 LRPAP1P30533 357 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 GGT5P36269 586 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 CAP2P40123 477 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 SERPINB9P50453 376 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 NRLP54845 237 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 MPP1Q00013 466 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 CD83Q01151 205 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 CUL2Q13617 745 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 EFR3AQ14156 821 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 DPYSL3Q14195 570 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 SEMA3AQ14563 771 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 IMPG1Q17R60 797 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ZIK1Q3SY52 487 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ZACNQ401N2 412 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 DNAJC24Q6P3W2 148 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 TIFABQ6ZNK6 161 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 PM20D2Q8IYS1 436 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 MCFD2Q8NI22 146 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ZHX1-C8orf76Q96EF9 292 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 NEDD4LQ96PU5 975 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 PITHD1Q9GZP4 211 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ING2Q9H160 280 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ASNSD1Q9NWL6 643 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 SIRT5Q9NXA8 310 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 AGTPBP1Q9UPW5 1226 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 HEATR9A2RTY3 570 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 APOC4-APOC2K7ER74 178 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 APOC2P02655 101 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 CFHP08603 1231 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 TFE3P19532 575 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ATP6V1B2P21281 511 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 UGT2B10P36537 528 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 PRIM2P49643 509 aa11.81□□□□□ -0.52
SHMT2-201ENST00000328923 ARHGDIBP52566 201 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms