RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TBCCQ15814 346 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 CTSL3PQ5NE16 218 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 KIAA0907Q7Z7F0 614 aaPredicted RBP14.87□□□□□ -0.03
TPM3-205ENST00000328159 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.87□□□□□ -0.03
TPM3-205ENST00000328159 ECHDC3Q96DC8 303 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 CNDP1Q96KN2 507 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 RAB3IPQ96QF0 476 aaPredicted RBP14.87□□□□□ -0.03
TPM3-205ENST00000328159 CCDC106Q9BWC9 280 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 SUV39H2Q9H5I1 410 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 ZDHHC6Q9H6R6 413 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
TPM3-205ENST00000328159 OAS3Q9Y6K5 1087 aaKnown RBP14.87□□□□□ -0.03
TPM3-205ENST00000328159 MATN2O00339 956 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 VPS26AO75436 327 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 CLDN7O95471 211 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 PYGLP06737 847 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 ESRRAP11474 423 aaPredicted RBP14.86□□□□□ -0.03
TPM3-205ENST00000328159 POLR2EP19388 210 aaKnown RBP14.86□□□□□ -0.03
TPM3-205ENST00000328159 CD9P21926 228 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 KCNC1P48547 511 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 RAD51Q06609 339 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 PAQR3Q6TCH7 311 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 FAM151BQ6UXP7 276 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 TMC5Q6UXY8 1006 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 DPY19L3Q6ZPD9 716 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 PACS2Q86VP3 889 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 TREML1Q86YW5 311 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 AHI1Q8N157 1196 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 STK40Q8N2I9 435 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 NAT16Q8N8M0 369 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 MAPK15Q8TD08 544 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 LRRC3BQ96PB8 259 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 LYSMD1Q96S90 227 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 GPR21Q99679 349 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 TFB2MQ9H5Q4 396 aaKnown RBP14.86□□□□□ -0.03
TPM3-205ENST00000328159 KLC4Q9NSK0 619 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 ZDHHC2Q9UIJ5 367 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 ERVW-1Q9UQF0 538 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 COMMD10Q9Y6G5 202 aa14.86□□□□□ -0.03
TPM3-205ENST00000328159 PRRC2BQ5JSZ5 2229 aaKnown RBP14.86□□□□□ -0.03
TPM3-205ENST00000328159 SLCO1B7G3V0H7 640 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 H3BMM5 538 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 GAPDHSO14556 408 aaPredicted RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 TRIM24O15164 1050 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 HDAC3O15379 428 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 GRID2O43424 1007 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 SMIM24O75264 130 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 NIPSNAP2O75323 286 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 WEE1P30291 646 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 NRIP1P48552 1158 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 ADARP55265 1226 aaKnown RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 UBAP2LQ14157 1087 aaKnown RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 DHCR24Q15392 516 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 DUSP6Q16828 381 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 SLC9B1Q4ZJI4 515 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 TMEM215Q68D42 235 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 CERS6Q6ZMG9 384 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 Q6ZVU0 165 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 RHEBL1Q8TAI7 183 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 GRIN3AQ8TCU5 1115 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 RSPRY1Q96DX4 576 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 ZNF641Q96N77 438 aaPredicted RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 SHCBP1LQ9BZQ2 653 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 DERL2Q9GZP9 239 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 DUS2Q9NX74 493 aaKnown RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 GALPQ9UBC7 116 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 VTI1BQ9UEU0 232 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 C2orf16Q68DN1 1984 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 NPIPB15A6NHN6 443 aaPredicted RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 GPR39O43194 453 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 MGRN1O60291 552 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 PRAMEF1O95521 474 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 ESR1P03372 595 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 CYP17A1P05093 508 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 ENO1P06733 434 aaKnown RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 BPIP17213 487 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 IMPDH1P20839 514 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 PBX2P40425 430 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 ATP6V0D1P61421 351 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 NFKB2Q00653 900 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 OR4D1Q15615 310 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 CRTC1Q6UUV9 634 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 TPRG1Q6ZUI0 275 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 USP45Q70EL2 814 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 TSPAN33Q86UF1 283 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 SERPINA9Q86WD7 417 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 CBARPQ8N350 705 aaPredicted RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 NKAPQ8N5F7 415 aaKnown RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 CHST14Q8NCH0 376 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 UTP4Q969X6 686 aaKnown RBP14.85□□□□□ -0.03
TPM3-205ENST00000328159 PHF21BQ96EK2 531 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 L3HYPDHQ96EM0 354 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 SCRN2Q96FV2 425 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 TBC1D10AQ9BXI6 508 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 P2RY12Q9H244 342 aa14.85□□□□□ -0.03
TPM3-205ENST00000328159 TRMT6Q9UJA5 497 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms