RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 POLR3BQ9NW08 1133 aaPredicted RBP18.81■□□□□ 0.6
SPSB1-201ENST00000328089 PRSS51A0A1B0GVH4 220 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 FFAR3O14843 346 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 CASQ2O14958 399 aaPredicted RBP18.81■□□□□ 0.6
SPSB1-201ENST00000328089 GPR42O15529 346 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 ZNF623O75123 536 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 CYBAP13498 195 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 UFM1P61960 85 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 CLCQ05315 142 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 SERINC3Q13530 473 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 FRG1Q14331 258 aaKnown RBP18.81■□□□□ 0.6
SPSB1-201ENST00000328089 CLDN19Q8N6F1 224 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 OR52B6Q8NGF0 335 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 EEF1AKMT1Q8WVE0 214 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 HIC2Q96JB3 615 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 TRIM62Q9BVG3 475 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 NDUFAF1Q9Y375 327 aa18.81■□□□□ 0.6
SPSB1-201ENST00000328089 ECI2O75521 394 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 TACR2P21452 398 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 CSRP3P50461 194 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 FOXD4Q12950 439 aaPredicted RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 ARTNQ5T4W7 220 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 ATXN7L2Q5T6C5 722 aaPredicted RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 ZFP1Q6P2D0 407 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 LARP4Q71RC2 724 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 PPM1MQ96MI6 270 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 TLR9Q9NR96 1032 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MAP10Q9P2G4 905 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 POLG2Q9UHN1 485 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SLC7A4O43246 635 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 CNPP09543 421 aaKnown RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 CKBP12277 381 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MTHFD2P13995 350 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 EIF4EBP2Q13542 120 aaPredicted RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 IKBKEQ14164 716 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 HMBOX1Q6NT76 420 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 LCA5Q86VQ0 697 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SLC22A9Q8IVM8 553 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 OR10Q1Q8NGQ4 319 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 GABPB2Q8TAK5 448 aaPredicted RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SOCS4Q8WXH5 440 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MTFMTQ96DP5 389 aaKnown RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SLC39A13Q96H72 371 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MAELQ96JY0 434 aaKnown RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 TSPAN18Q96SJ8 248 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MFSD1Q9H3U5 465 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 TLR8Q9NR97 1041 aaKnown RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 AFF4Q9UHB7 1163 aaKnown RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SCML2Q9UQR0 700 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SH3BP1Q9Y3L3 701 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 GDF5P43026 501 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 RPL5P46777 297 aaKnown RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 NFE2Q16621 373 aaPredicted RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 TMEM259Q4ZIN3 620 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 C6orf10Q5SRN2 563 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 KIAA0408Q6ZU52 694 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 CHSY3Q70JA7 882 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MIER2Q8N344 545 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 FNDC5Q8NAU1 212 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 MDGA1Q8NFP4 955 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 CCDC126Q96EE4 140 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 HGH1Q9BTY7 390 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 PRDM5Q9NQX1 630 aaPredicted RBP18.8■□□□□ 0.6
SPSB1-201ENST00000328089 PCDHB8Q9UN66 801 aa18.8■□□□□ 0.6
SPSB1-201ENST00000328089 SEPT4O43236 478 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 SNX2O60749 519 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 OR4F21O95013 312 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 ALPIP09923 528 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 ZNF26P17031 533 aaPredicted RBP18.79■□□□□ 0.6
SPSB1-201ENST00000328089 HOXC8P31273 242 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 ZNF135P52742 658 aaPredicted RBP18.79■□□□□ 0.6
SPSB1-201ENST00000328089 TIAL1Q01085 375 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPSB1-201ENST00000328089 RHDQ02161 417 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 MILR1Q7Z6M3 343 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 MFN1Q8IWA4 741 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 DBF4BQ8NFT6 615 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 LINC01599Q8WXQ3 324 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 BTBD9Q96Q07 612 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 TMEM248Q9NWD8 314 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 RNF11Q9Y3C5 154 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 PCDHB9Q9Y5E1 797 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 TNFAIP8O95379 198 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 PRAMEF12O95522 483 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 DNAJB2P25686 324 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 SATB1Q01826 763 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 FAM45BPQ6NSW5 357 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 ADCY4Q8NFM4 1077 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 TSPAN14Q8NG11 270 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 FAM45AQ8TCE6 357 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 WBP2Q969T9 261 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 FBXL20Q96IG2 436 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 VPS50Q96JG6 964 aa18.79■□□□□ 0.6
SPSB1-201ENST00000328089 MC4RP32245 332 aa18.78■□□□□ 0.6
SPSB1-201ENST00000328089 DGKQP52824 942 aa18.78■□□□□ 0.6
SPSB1-201ENST00000328089 MAPRE2Q15555 327 aa18.78■□□□□ 0.6
SPSB1-201ENST00000328089 LRRC73Q5JTD7 316 aa18.78■□□□□ 0.6
SPSB1-201ENST00000328089 SAMD4BQ5PRF9 694 aaKnown RBP18.78■□□□□ 0.6
SPSB1-201ENST00000328089 SLC24A5Q71RS6 500 aa18.78■□□□□ 0.6
SPSB1-201ENST00000328089 PTCD2Q8WV60 388 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms