RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PIGWQ7Z7B1 504 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TMEM199Q8N511 208 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 PSMA8Q8TAA3 256 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 OXCT2Q9BYC2 517 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 PCDHB9Q9Y5E1 797 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 RAI2Q9Y5P3 530 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 SLC28A2O43868 658 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 STX11O75558 287 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 HLA-DQA2P01906 255 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 GLUD2P49448 558 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 CLCNKBP51801 687 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 COPZ1P61923 177 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 DSC2Q02487 901 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 PTCHD4Q6ZW05 846 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 NIPA2Q8N8Q9 360 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 OR4K2Q8NGD2 314 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 BTBD3Q9Y2F9 522 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 USP2O75604 605 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 CXCR3P49682 368 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 AGMOQ6ZNB7 445 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 MOSPD2Q8NHP6 518 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ASZ1Q8WWH4 475 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 HMCESQ96FZ2 354 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 LRTM1Q9HBL6 345 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ABCB10Q9NRK6 738 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ZFP37Q9Y6Q3 630 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ADAMTS3O15072 1205 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 PKMP14618 531 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 SLC6A2P23975 617 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 CORO1AP31146 461 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 TAF10Q12962 218 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ASTE1Q2TB18 679 aaPredicted RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 VSTM1Q6UX27 236 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 ZNF781Q8N8C0 355 aa10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 AARSD1Q9BTE6 412 aaKnown RBP10.88□□□□□ -0.67
SNRNP200-201ENST00000323853 SNPHO15079 494 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 HIST1H2ABP04908 130 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 NDST2P52849 883 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CCL23P55773 120 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CPTPQ5TA50 214 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CLEC6AQ6EIG7 209 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 GLYATQ6IB77 296 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 HIST3H2AQ7L7L0 130 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FAM47BQ8NA70 645 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 HIST1H2ACQ93077 130 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 DGCR14Q96DF8 476 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 AGAP2Q99490 1192 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 ARHGEF3Q9NR81 526 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 URADA6NGE7 173 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CHURC1-FNTBB4DL54 471 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 NPHS1O60500 1241 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FADS2O95864 444 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 ADH1AP07327 375 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 SULT2A1Q06520 285 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PLA2G4EQ3MJ16 856 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PERM1Q5SV97 790 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 RNF44Q7L0R7 432 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 OR6K2Q8NGY2 324 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CLHC1Q8NHS4 586 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 SPPL2BQ8TCT7 592 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CXorf40BQ96DE9 158 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CRISPLD1Q9H336 500 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 NEDD8-MDP1E9PL57 170 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FPGTO14772 594 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 SERPINB7O75635 380 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PEX6Q13608 980 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 GTF2H2Q13888 395 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 TCEA2Q15560 299 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 VPS26BQ4G0F5 336 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 DCAF12L1Q5VU92 463 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FSTL4Q6MZW2 842 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 GTF2H2CQ6P1K8 395 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 ZDHHC24Q6UX98 284 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 COLGALT2Q8IYK4 626 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 IZUMO1Q8IYV9 350 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 DQX1Q8TE96 717 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 RERGQ96A58 199 aaPredicted RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FAXDC2Q96IV6 333 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PTGFRNQ9P2B2 879 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FBXW11Q9UKB1 542 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 MFHAS1Q9Y4C4 1052 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CAPN8A6NHC0 703 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 DNM1LO00429 736 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 LRIG2O94898 1065 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 GOT2P00505 430 aaKnown RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 TRBC1P01850 177 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 FABP3P05413 133 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 ELFN1P0C7U0 828 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 UROSP10746 265 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 PRG2P13727 222 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CTSEP14091 401 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 ITPKAP23677 461 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CTNNB1P35222 781 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 SPAM1P38567 509 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CLCQ05315 142 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 MTAPQ13126 283 aa10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 CBX2Q14781 532 aaPredicted RBP10.87□□□□□ -0.67
SNRNP200-201ENST00000323853 TAF13Q15543 124 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms