RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 PLEKHM1Q9Y4G2 1056 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPP40-201ENST00000319533 B3GALT1Q9Y5Z6 326 aa14.16□□□□□ -0.14
RPP40-201ENST00000319533 MYBL1P10243 752 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 UGT1A3P35503 534 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 ARL4AP40617 200 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 ACTR1BP42025 376 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 ACTR1AP61163 376 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 MAXP61244 160 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 PTSQ03393 145 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 PTPRRQ15256 657 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 PYCR3Q53H96 274 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.15□□□□□ -0.14
RPP40-201ENST00000319533 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 MARC1Q5VT66 337 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 NKAIN2Q5VXU1 208 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 LRRC49Q8IUZ0 686 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 RAVER1Q8IY67 606 aaKnown RBP14.15□□□□□ -0.14
RPP40-201ENST00000319533 BMPERQ8N8U9 685 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 RNF214Q8ND24 703 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 CCDC112Q8NEF3 446 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 COX14Q96I36 57 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 OR2M4Q96R27 311 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 ASPSCR1Q9BZE9 553 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 ISCUQ9H1K1 167 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 SUDS3Q9H7L9 328 aaPredicted RBP14.15□□□□□ -0.14
RPP40-201ENST00000319533 MRPL47Q9HD33 250 aaKnown RBP14.15□□□□□ -0.14
RPP40-201ENST00000319533 TUBD1Q9UJT1 453 aa14.15□□□□□ -0.14
RPP40-201ENST00000319533 SERPING1P05155 500 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 PYGLP06737 847 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 PDHA1P08559 390 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 RARAP10276 462 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 TCF4P15884 667 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 ZNF30P17039 623 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 CSTF2P33240 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPP40-201ENST00000319533 SERPINB6P35237 376 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 MMP13P45452 471 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 GPR1P46091 355 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 RAB15P59190 212 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 BIRC2Q13490 618 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 LRP8Q14114 963 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 TRIM14Q14142 442 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 ALG1LQ6GMV1 187 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 BORAQ6PGQ7 559 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 RFLNAQ6ZTI6 216 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 ATPAF2Q8N5M1 289 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 NSMCE1Q8WV22 266 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 TEKT4Q8WW24 435 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 JPH3Q8WXH2 748 aaPredicted RBP14.14□□□□□ -0.15
RPP40-201ENST00000319533 ART4Q93070 314 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 ZNF653Q96CK0 615 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 AP2M1Q96CW1 435 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 PCDH18Q9HCL0 1135 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 OCIAD1Q9NX40 245 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 SLC39A1Q9NY26 324 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 KCNK4Q9NYG8 393 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 FLNCQ14315 2725 aa14.14□□□□□ -0.15
RPP40-201ENST00000319533 A0A0J9YYE9 177 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 GOLGA6CA6NDK9 693 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 GOLGA6BA6NDN3 693 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 CAPN5O15484 640 aaPredicted RBP14.13□□□□□ -0.15
RPP40-201ENST00000319533 TRBC1P01850 177 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 GYPCP04921 128 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 TPM1P09493 284 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 GOLGA6DP0CG33 693 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 LIFP15018 202 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 CTPS1P17812 591 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 IL4RP24394 825 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 STC1P52823 247 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 IHHQ14623 411 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 SMTNL2Q2TAL5 461 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 LRRC66Q68CR7 880 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 TXNRD3NBQ6F5E7 133 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 DOK6Q6PKX4 331 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 WDR74Q6RFH5 385 aaPredicted RBP14.13□□□□□ -0.15
RPP40-201ENST00000319533 ARHGAP22Q7Z5H3 698 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 NRSN1Q8IZ57 195 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 CACNA2D3Q8IZS8 1091 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 NDUFAF2Q8N183 169 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 IL22RA1Q8N6P7 574 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 NIPA2Q8N8Q9 360 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 FAM71BQ8TC56 605 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 SLC37A2Q8TED4 501 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 MAML1Q92585 1016 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 SCAMP4Q969E2 229 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 CATSPER2Q96P56 530 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 TEFMQ96QE5 360 aaKnown RBP14.13□□□□□ -0.15
RPP40-201ENST00000319533 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.13□□□□□ -0.15
RPP40-201ENST00000319533 GOLGA6AQ9NYA3 693 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 RCOR3Q9P2K3 495 aaPredicted RBP14.13□□□□□ -0.15
RPP40-201ENST00000319533 CD84Q9UIB8 345 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 PILRAQ9UKJ1 303 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 TMEM98Q9Y2Y6 226 aa14.13□□□□□ -0.15
RPP40-201ENST00000319533 ZFC3H1O60293 1989 aaKnown RBP14.13□□□□□ -0.15
RPP40-201ENST00000319533 A0A0U1RQS6 177 aa14.12□□□□□ -0.15
RPP40-201ENST00000319533 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
RPP40-201ENST00000319533 RAD1O60671 282 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms