RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TSPAN6O43657 245 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 PAPSS2O95340 614 aaPredicted RBP15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 FNTBP49356 437 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 XIAPP98170 497 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 SGCGQ13326 291 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 TMEM52BQ4KMG9 183 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 SETMARQ53H47 684 aaPredicted RBP15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 FASTKD1Q53R41 847 aaKnown RBP15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 PDPK2PQ6A1A2 396 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 NEPROQ6NW34 567 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 ARMCX6Q7L4S7 300 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 MREGQ8N565 214 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 DTD2Q96FN9 168 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 LENG8Q96PV6 779 aaPredicted RBP15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 PAFAH2Q99487 392 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 MBNL1Q9NR56 388 aaKnown RBP15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 CRYL1Q9Y2S2 319 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 IGHV1OR15-9A0A0B4J2B8 117 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 UBA6A0AVT1 1052 aaPredicted RBP15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 FADS2P1A8MWK0 482 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 H0Y858 1186 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 H0Y8X5 98 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 AXIN1O15169 862 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 RAD51BO15315 384 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 OR1I1O60431 355 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 C1QAP02745 245 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 SAT1P21673 171 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 PMLP29590 882 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 CD6P30203 668 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 RPS21P63220 83 aaKnown RBP15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 PPARDQ03181 441 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 MGAT5Q09328 741 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 LAMB3Q13751 1172 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 BMPR2Q13873 1038 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 TEDDM1Q5T9Z0 273 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 AFTPHQ6ULP2 937 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 TECPR1Q7Z6L1 1165 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 C1orf210Q8IVY1 113 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 COQ10AQ96MF6 247 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 SRPK1Q96SB4 655 aaKnown RBP15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 CYTH2Q99418 400 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 FUT8Q9BYC5 575 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 ACSS3Q9H6R3 686 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 CRLS1Q9UJA2 301 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 OR1A2Q9Y585 309 aa15.32■□□□□ 0.04
PDLIM5-202ENST00000318007 LRRC72A6NJI9 287 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 AP1G1O43747 822 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 BCKDHBP21953 392 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 CLCN5P51795 746 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 CLDN2P57739 230 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 RPL6Q02878 288 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 ACVR1Q04771 509 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 NFATC2Q13469 925 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 ZNF284Q2VY69 593 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 CEP85LQ5SZL2 805 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 DET1Q7L5Y6 550 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 HDXQ7Z353 690 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 STRA8Q7Z7C7 330 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 CAMKK1Q8N5S9 505 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 CDKL2Q92772 493 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 BOCQ9BWV1 1114 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 COL25A1Q9BXS0 654 aaPredicted RBP15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 SLC17A9Q9BYT1 436 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 WSB2Q9NYS7 404 aaPredicted RBP15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 TXNDC16Q9P2K2 825 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 SLCO1B1Q9Y6L6 691 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 GON4LQ3T8J9 2241 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 NDUFS2O75306 463 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 SPAG6O75602 509 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 HAUS5O94927 633 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 MAOBP27338 520 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 FOXN2P32314 431 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 GPR1P46091 355 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 HENMT1Q5T8I9 393 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 HORMAD1Q86X24 394 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 OR2T34Q8NGX1 318 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 ZNF398Q8TD17 642 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 FUBP1Q96AE4 644 aaKnown RBP15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 RUFY1Q96T51 708 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 NDNQ99608 321 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 APPL1Q9UKG1 709 aa15.31■□□□□ 0.04
PDLIM5-202ENST00000318007 FAM159BA6NKW6 160 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 SLC7A4O43246 635 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 MAP3K13O43283 966 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 ZNF217O75362 1048 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 ITGALP20701 1170 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 GCAP28676 217 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 SUOXP51687 545 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 ZNF844Q08AG5 666 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 SFSWAPQ12872 951 aaKnown RBP15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 INPP5AQ14642 412 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 IRF4Q15306 451 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 TCEA2Q15560 299 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 WSCD2Q2TBF2 565 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
PDLIM5-202ENST00000318007 CNSTQ6PJW8 725 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms