RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 MFSD3Q96ES6 412 aa15.4■□□□□ 0.06
HNF4A-202ENST00000316673 ZC3H10Q96K80 434 aaKnown RBP15.4■□□□□ 0.06
HNF4A-202ENST00000316673 GPR174Q9BXC1 333 aa15.4■□□□□ 0.06
HNF4A-202ENST00000316673 DUSP15Q9H1R2 295 aaPredicted RBP15.4■□□□□ 0.06
HNF4A-202ENST00000316673 MAGEE1Q9HCI5 957 aa15.4■□□□□ 0.06
HNF4A-202ENST00000316673 TREX1Q9NSU2 369 aa15.4■□□□□ 0.06
HNF4A-202ENST00000316673 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
HNF4A-202ENST00000316673 PKP3Q9Y446 797 aa15.4■□□□□ 0.06
HNF4A-202ENST00000316673 EML5Q05BV3 1969 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 PSMD11O00231 422 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 LPOP22079 712 aaPredicted RBP15.39■□□□□ 0.05
HNF4A-202ENST00000316673 NMBRP28336 390 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 VIPR1P32241 457 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 DPP6P42658 865 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 ARHGEF7Q14155 803 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 SEPT7Q16181 437 aaKnown RBP15.39■□□□□ 0.05
HNF4A-202ENST00000316673 QPCTQ16769 361 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 KIAA0895LQ68EN5 471 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 MRNIPQ6NTE8 343 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 TRMT10BQ6PF06 316 aaKnown RBP15.39■□□□□ 0.05
HNF4A-202ENST00000316673 FAM160A2Q8N612 972 aaPredicted RBP15.39■□□□□ 0.05
HNF4A-202ENST00000316673 CXorf40AQ8TE69 158 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 SSU72Q9NP77 194 aaKnown RBP15.39■□□□□ 0.05
HNF4A-202ENST00000316673 CD93Q9NPY3 652 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 EURLQ9NYK6 297 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 MBD1Q9UIS9 605 aaPredicted RBP15.39■□□□□ 0.05
HNF4A-202ENST00000316673 VPS9D1Q9Y2B5 631 aa15.39■□□□□ 0.05
HNF4A-202ENST00000316673 FANCMQ8IYD8 2048 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 FAM47DPA6NHR8 397 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 METTL12A8MUP2 240 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 HRO43593 1189 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 VAPBO95292 243 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 ELFN1P0C7U0 828 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 ERVK-10P10266 1014 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 GCAP28676 217 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 PPARGP37231 505 aaPredicted RBP15.38■□□□□ 0.05
HNF4A-202ENST00000316673 POLD2P49005 469 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 TCF15Q12870 199 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 SIM2Q14190 667 aaPredicted RBP15.38■□□□□ 0.05
HNF4A-202ENST00000316673 NUMA1Q14980 2115 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 CNGA3Q16281 694 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 SETMARQ53H47 684 aaPredicted RBP15.38■□□□□ 0.05
HNF4A-202ENST00000316673 HSP90AA5PQ58FG0 334 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 WDR45BQ5MNZ6 344 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 GALNT7Q86SF2 657 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 SDCCAG8Q86SQ7 713 aaPredicted RBP15.38■□□□□ 0.05
HNF4A-202ENST00000316673 TRABD2AQ86V40 505 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 HORMAD1Q86X24 394 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 CNTN4Q8IWV2 1026 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
HNF4A-202ENST00000316673 OTUD6BQ8N6M0 293 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 PRSS33Q8NF86 280 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 ASB12Q8WXK4 309 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.38■□□□□ 0.051e-6■■■■■ 28
HNF4A-202ENST00000316673 CABS1Q96KC9 395 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 FCRL3Q96P31 734 aaPredicted RBP15.38■□□□□ 0.05
HNF4A-202ENST00000316673 SELENOSQ9BQE4 189 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 C1QTNF7Q9BXJ2 289 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 GPR63Q9BZJ6 419 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 NKIRAS1Q9NYS0 192 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 B4GALT6Q9UBX8 382 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 RAB23Q9ULC3 237 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 INVSQ9Y283 1065 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 SPAG17Q6Q759 2223 aa15.38■□□□□ 0.05
HNF4A-202ENST00000316673 STX7O15400 261 aaKnown RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 LATO43561 262 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 RNGTTO60942 597 aaKnown RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 BRAFP15056 766 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 HNF1BP35680 557 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 SLC18A1P54219 525 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 SGCGQ13326 291 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.053e-7■■■□□ 15.9
HNF4A-202ENST00000316673 PLK5Q496M5 336 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 TEDDM1Q5T9Z0 273 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 ZDHHC20Q5W0Z9 365 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 PMS2CLQ68D20 193 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 NEPROQ6NW34 567 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 ESRP1Q6NXG1 681 aaKnown RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 AFTPHQ6ULP2 937 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 CES3Q6UWW8 571 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 STRA8Q7Z7C7 330 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 FRMD1Q8N878 549 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 OR6P1Q8NGX9 317 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 ACMSDQ8TDX5 336 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 ZBTB9Q96C00 473 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 TTC1Q99614 292 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 IQCGQ9H095 443 aaKnown RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 PLAC1Q9HBJ0 212 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 IARS2Q9NSE4 1012 aaKnown RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 NLE1Q9NVX2 485 aaPredicted RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 CTNNAL1Q9UBT7 734 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
HNF4A-202ENST00000316673 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.37■□□□□ 0.05
HNF4A-202ENST00000316673 TRPM6Q9BX84 2022 aa15.36■□□□□ 0.05
HNF4A-202ENST00000316673 A0A1W2PQU0 124 aa15.36■□□□□ 0.05
HNF4A-202ENST00000316673 NPIPB15A6NHN6 443 aaPredicted RBP15.36■□□□□ 0.05
HNF4A-202ENST00000316673 MEI4A8MW99 385 aa15.36■□□□□ 0.05
HNF4A-202ENST00000316673 C10orf142B7Z368 130 aa15.36■□□□□ 0.05
HNF4A-202ENST00000316673 SPINT1O43278 529 aa15.36■□□□□ 0.05
HNF4A-202ENST00000316673 LDB2O43679 373 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms