RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CDYLQ9Y232 598 aa18.28■□□□□ 0.52
CCDC43-201ENST00000315286 OAS3Q9Y6K5 1087 aaKnown RBP18.28■□□□□ 0.52
CCDC43-201ENST00000315286 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.28■□□□□ 0.52
CCDC43-201ENST00000315286 LOC100653049A0A140TA62 436 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 PFDN6O15212 129 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 GRM6O15303 877 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 SOCS5O75159 536 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 SMIM24O75264 130 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 NIPSNAP2O75323 286 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ENTPD5O75356 428 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 KRT34O76011 436 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ARHGEF15O94989 841 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 FGF19O95750 216 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 PENKP01210 267 aaPredicted RBP18.27■□□□□ 0.52
CCDC43-201ENST00000315286 MTHFD2P13995 350 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 DDX6P26196 483 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCDC43-201ENST00000315286 CPOXP36551 454 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 MXRA7P84157 204 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 NFKB2Q00653 900 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 KLF10Q13118 480 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 FUT11Q495W5 492 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ACAD11Q709F0 780 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 METTL3Q86U44 580 aaKnown RBP18.27■□□□□ 0.52
CCDC43-201ENST00000315286 CUZD1Q86UP6 607 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ZSWIM9Q86XI8 627 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 RHEBL1Q8TAI7 183 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ATOH8Q96SQ7 321 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 LINC00597Q9H2U6 94 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 MMADHCQ9H3L0 296 aaPredicted RBP18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ATP13A3Q9H7F0 1226 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 ZFYVE1Q9HBF4 777 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 EML4Q9HC35 981 aaKnown RBP18.27■□□□□ 0.52
CCDC43-201ENST00000315286 IKZF3Q9UKT9 509 aa18.27■□□□□ 0.52
CCDC43-201ENST00000315286 NEDD8-MDP1E9PL57 170 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 UBXN8O00124 270 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 PEX11AO75192 247 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 SUPT7LO94864 414 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 TPBGLP0DKB5 382 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 SYN1P17600 705 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 HNF1BP35680 557 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 COPAP53621 1224 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 CACNG1Q06432 222 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 NAA25Q14CX7 972 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 UNC50Q53HI1 259 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 ARHGAP15Q53QZ3 475 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 STON2Q8WXE9 905 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 CMTM5Q96DZ9 223 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 DERL2Q9GZP9 239 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 G3BP2Q9UN86 482 aaKnown RBP18.27■□□□□ 0.51
CCDC43-201ENST00000315286 FIS1Q9Y3D6 152 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 HCFC2Q9Y5Z7 792 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 SLC30A1Q9Y6M5 507 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 ANKRD12Q6UB98 2062 aa18.27■□□□□ 0.51
CCDC43-201ENST00000315286 CHD9Q3L8U1 2897 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 C1orf232A0A0U1RR37 186 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 UBFD1O14562 309 aaKnown RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 MAGEC1O60732 1142 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 MYOGP15173 224 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 CD1EP15812 388 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 TSPAN8P19075 237 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 HERVK_113P63132 956 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 RAD51Q06609 339 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 GALNT1Q10472 559 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 E2F5Q15329 346 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 CDKN3Q16667 212 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 DNAL1Q4LDG9 190 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 AARS2Q5JTZ9 985 aaKnown RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 ZNF697Q5TEC3 545 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 TMEM198Q66K66 360 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 NXNQ6DKJ4 435 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 RTL10Q7L3V2 364 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 C7orf61Q8IZ16 206 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 PTGR2Q8N8N7 351 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 SIDT2Q8NBJ9 832 aaKnown RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 KIAA1191Q96A73 305 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 ZSWIM3Q96MP5 696 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 CCDC28BQ9BUN5 200 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 BBS2Q9BXC9 721 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 ERVK-6Q9BXR3 956 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 HS3ST2Q9Y278 367 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 BNIP3LO60238 219 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 VPS26AO75436 327 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 CLDN7O95471 211 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 PYGLP06737 847 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 PTGER3P43115 390 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 SNRPD1P62314 119 aaKnown RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 SLC25A3Q00325 362 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 UBE3AQ05086 875 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 FAM151BQ6UXP7 276 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 ARHGAP24Q8N264 748 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 IRF7Q92985 503 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 CLPTM1LQ96KA5 538 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 THTPAQ9BU02 230 aa18.26■□□□□ 0.51
CCDC43-201ENST00000315286 NKX1-2Q9UD57 310 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-201ENST00000315286 TRPC5OSA6NMA1 111 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 A8MX80 341 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 SDHDO14521 159 aa18.25■□□□□ 0.51
CCDC43-201ENST00000315286 GAPDHSO14556 408 aaPredicted RBP18.25■□□□□ 0.51
CCDC43-201ENST00000315286 PER2O15055 1255 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms