RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 Q8N9G6 341 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 DNAJB14Q8TBM8 379 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 OR2AG1Q9H205 316 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 RCOR3Q9P2K3 495 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 ZNF8P17098 575 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 KCNQ1P51787 676 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 RAD23AP54725 363 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 HECTD2Q5U5R9 776 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 Q6ZVU0 165 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 AMZ2Q86W34 360 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 PANX1Q96RD7 426 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 GPR21Q99679 349 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 SLC25A51Q9H1U9 297 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 LRRC19Q9H756 370 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 COQ6Q9Y2Z9 468 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 HTR7P34969 479 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 NOMO1Q15155 1222 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 INTS11Q5TA45 600 aaKnown RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 SH3PXD2AQ5TCZ1 1133 aa13.45□□□□□ -0.26
RFFL-201ENST00000315249 ZNF490Q9ULM2 529 aaPredicted RBP13.45□□□□□ -0.26
RFFL-201ENST00000315249 FBXO15Q8NCQ5 510 aaPredicted RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 NELL1Q92832 810 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 CNTN3Q9P232 1028 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 MAPRE3Q9UPY8 281 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 MCIDASD6RGH6 385 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 CNOT3O75175 753 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 CHRNA1P02708 482 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 SHBGP04278 402 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ACP5P13686 325 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 MTHFRP42898 656 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 GHRHRQ02643 423 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ITIH4Q14624 930 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 PLEKHA7Q6IQ23 1121 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ZNF280BQ86YH2 543 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 MCEMP1Q8IX19 187 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ADCY4Q8NFM4 1077 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 CLHC1Q8NHS4 586 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 BDH2Q9BUT1 245 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 UGT2B28Q9BY64 529 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 WDR26Q9H7D7 661 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 MRPL28Q13084 256 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 ATP13A5Q4VNC0 1218 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 GAL3ST4Q96RP7 486 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 SUZ12Q15022 739 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 LSM12Q3MHD2 195 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 PCDH20Q8N6Y1 951 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 LMX1AQ8TE12 382 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 PXYLP1Q8TE99 480 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ABI3Q9P2A4 366 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 SNED1Q8TER0 1413 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ADAMTS3O15072 1205 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 KRT75O95678 551 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 CFHP08603 1231 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 CCNYL3P0C7X3 344 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 HLA-EP13747 358 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 KCNA3P22001 575 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 SYPL2Q5VXT5 272 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 WDR36Q8NI36 951 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 S100A13Q99584 98 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 MRTO4Q9UKD2 239 aaKnown RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 STK32CQ86UX6 486 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 RELTQ969Z4 430 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ACDQ96AP0 544 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 OXNAD1Q96HP4 312 aaPredicted RBP13.44□□□□□ -0.26
RFFL-201ENST00000315249 HAPLN3Q96S86 360 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 SPATA5L1Q9BVQ7 753 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 ANKZF1Q9H8Y5 726 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 FBXW2Q9UKT8 454 aa13.44□□□□□ -0.26
RFFL-201ENST00000315249 IRAK2O43187 625 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 GALTP07902 379 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 C16orf72Q14CZ0 275 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 BNIPLQ7Z465 357 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 SUV39H2Q9H5I1 410 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
RFFL-201ENST00000315249 KLHL1Q9NR64 748 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ARL5AQ9Y689 179 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 FCHO1O14526 889 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 WNT9AO14904 365 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 VNN1O95497 513 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 GOT2P00505 430 aaKnown RBP13.43□□□□□ -0.26
RFFL-201ENST00000315249 FCGR1AP12314 374 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 PSMC3P17980 439 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 PKNOX1P55347 436 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 LDLRAP1Q5SW96 308 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 RIBC2Q9H4K1 309 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 C3orf14Q9HBI5 128 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ERVK-11Q9UQG0 969 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 TK2O00142 265 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 SLC35G6P0C7Q6 338 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 LIPMQ5VYY2 423 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ZNF567Q8N184 647 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ZNF516Q92618 1163 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 CDRT15Q96T59 188 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms