RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CDKN1CP49918 316 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 GNG11P61952 73 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 ATP13A5Q4VNC0 1218 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 FAM151BQ6UXP7 276 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 ARHGEF18Q6ZSZ5 1173 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 NRROSQ86YC3 692 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 SPNS2Q8IVW8 549 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 TTC13Q8NBP0 860 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 OR52K1Q8NGK4 314 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 CAPZA3Q96KX2 299 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 APOLD1Q96LR9 279 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 ZNF778Q96MU6 729 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 WDR92Q96MX6 357 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 C1QTNF7Q9BXJ2 289 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 FAM83DQ9H4H8 585 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 FAM96AQ9H5X1 160 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 CARS2Q9HA77 564 aaKnown RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 IL26Q9NPH9 171 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 RABGEF1Q9UJ41 708 aa11.98□□□□□ -0.49
SCFD1-201ENST00000311943 TPX2Q9ULW0 747 aaKnown RBP11.98□□□□□ -0.49
SCFD1-201ENST00000311943 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 TRBV23OR9-2A0A075B6M9 112 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 PRSS38A1L453 326 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 ADRB1P08588 477 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 ZNF30P17039 623 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 RPL26P61254 145 aaKnown RBP11.97□□□□□ -0.49
SCFD1-201ENST00000311943 YPEL5P62699 121 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 CRADDP78560 199 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 MPP3Q13368 585 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 POU6F1Q14863 301 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 CERCAMQ5T4B2 595 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 TRIM56Q9BRZ2 755 aaKnown RBP11.97□□□□□ -0.49
SCFD1-201ENST00000311943 SPATA16Q9BXB7 569 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 SLC32A1Q9H598 525 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 RAB6BQ9NRW1 208 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 SPATS2LQ9NUQ6 558 aaKnown RBP11.97□□□□□ -0.49
SCFD1-201ENST00000311943 IL17CQ9P0M4 197 aa11.97□□□□□ -0.49
SCFD1-201ENST00000311943 RPL26L1Q9UNX3 145 aaKnown RBP11.97□□□□□ -0.49
SCFD1-201ENST00000311943 PSMD11O00231 422 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 CACNB4O00305 520 aaPredicted RBP11.96□□□□□ -0.49
SCFD1-201ENST00000311943 PDE2AO00408 941 aaPredicted RBP11.96□□□□□ -0.49
SCFD1-201ENST00000311943 ZSCAN12O43309 604 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 ASMTLO95671 621 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 LDOC1O95751 146 aaPredicted RBP11.96□□□□□ -0.49
SCFD1-201ENST00000311943 MYCLP1P12525 358 aaPredicted RBP11.96□□□□□ -0.49
SCFD1-201ENST00000311943 GEMP55040 296 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 HNRNPKP61978 463 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCFD1-201ENST00000311943 DPTQ07507 201 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 CHRNA6Q15825 494 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 CCNG2Q16589 344 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 PARP6Q2NL67 630 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 PLA2G4EQ3MJ16 856 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 GUSBP11Q6P575 273 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 SLC35F3Q8IY50 421 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 OR4K2Q8NGD2 314 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 TBL1YQ9BQ87 522 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 FRMD8Q9BZ67 464 aaPredicted RBP11.96□□□□□ -0.49
SCFD1-201ENST00000311943 ATXN10Q9UBB4 475 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 FTSJ1Q9UET6 329 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 FKBPLQ9UIM3 349 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 DMXL2Q8TDJ6 3036 aa11.96□□□□□ -0.49
SCFD1-201ENST00000311943 OR51F1A6NGY5 319 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 MAGEC1O60732 1142 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 F7P08709 466 aaPredicted RBP11.96□□□□□ -0.5
SCFD1-201ENST00000311943 SDHBP21912 280 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 CA4P22748 312 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 CCDC173Q0VFZ6 552 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 PERM1Q5SV97 790 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 ITPRIPL1Q6GPH6 555 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 SLC30A9Q6PML9 568 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 OR4C6Q8NH72 309 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 RTP4Q96DX8 246 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 COX14Q96I36 57 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 SLC13A1Q9BZW2 595 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.5
SCFD1-201ENST00000311943 GULP1Q9UBP9 304 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 SLC23A2Q9UGH3 650 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 SLC2A6Q9UGQ3 507 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 SNX12Q9UMY4 172 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 CHD8Q9HCK8 2581 aa11.96□□□□□ -0.5
SCFD1-201ENST00000311943 RP1P56715 2156 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 ARHGEF17Q96PE2 2063 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-201ENST00000311943 PRAMEF33A0A0G2JMD5 474 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 CPED1A4D0V7 1026 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 LDB2O43679 373 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 KIF5CO60282 957 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 ANXA9O76027 345 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 ZNF8P17098 575 aaPredicted RBP11.95□□□□□ -0.5
SCFD1-201ENST00000311943 HTR1BP28222 390 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 HMGCLP35914 325 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 ACADVLP49748 655 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 ARSDP51689 593 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 KIAA1024LP59773 190 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms