RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 SMURF2Q9HAU4 748 aa13.42□□□□□ -0.26
CCDC13-201ENST00000310232 ABCD2Q9UBJ2 740 aa13.42□□□□□ -0.26
CCDC13-201ENST00000310232 FAM50BQ9Y247 325 aa13.42□□□□□ -0.26
CCDC13-201ENST00000310232 IPPQ9Y573 584 aa13.42□□□□□ -0.26
CCDC13-201ENST00000310232 OAS3Q9Y6K5 1087 aaKnown RBP13.42□□□□□ -0.26
CCDC13-201ENST00000310232 CASTOR2A6NHX0 329 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 DYNC1LI2O43237 492 aaPredicted RBP13.41□□□□□ -0.26
CCDC13-201ENST00000310232 TSPAN3O60637 253 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 AGXTP21549 392 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 SCAPQ12770 1279 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 RALGAPA2Q2PPJ7 1873 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 SLC2A7Q6PXP3 512 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 RANBP10Q6VN20 620 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 MIER2Q8N344 545 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 ZNF513Q8N8E2 541 aaPredicted RBP13.41□□□□□ -0.26
CCDC13-201ENST00000310232 PPM1MQ96MI6 270 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 ZNF560Q96MR9 790 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 KCTD14Q9BQ13 255 aaPredicted RBP13.41□□□□□ -0.26
CCDC13-201ENST00000310232 PRDM8Q9NQV8 689 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 POLE4Q9NR33 117 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 RGS18Q9NS28 235 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 WARS2Q9UGM6 360 aaKnown RBP13.41□□□□□ -0.26
CCDC13-201ENST00000310232 CDH7Q9ULB5 785 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 ASB1Q9Y576 335 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 ACTL7AQ9Y615 435 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 PAGE1O75459 146 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 HRH2P25021 359 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 OPRL1P41146 370 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 CLCNKBP51801 687 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 SLC10A7Q0GE19 358 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 KYAT1Q16773 422 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 SV2CQ496J9 727 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 XAF1Q6GPH4 301 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 CILP2Q8IUL8 1156 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 TNIP2Q8NFZ5 429 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 FCRL5Q96RD9 977 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 CHID1Q9BWS9 393 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 CARS2Q9HA77 564 aaKnown RBP13.41□□□□□ -0.26
CCDC13-201ENST00000310232 MRPL40Q9NQ50 206 aaKnown RBP13.41□□□□□ -0.26
CCDC13-201ENST00000310232 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 ACTR3BQ9P1U1 418 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 INVSQ9Y283 1065 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 ARL5AQ9Y689 179 aa13.41□□□□□ -0.26
CCDC13-201ENST00000310232 DOCK3Q8IZD9 2030 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 F8W810 466 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 C1RP00736 705 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 MTHFD2P13995 350 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 SMPD1P17405 629 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 CCNA2P20248 432 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 IL12AP29459 219 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 CCR1P32246 355 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 GGT5P36269 586 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 TIAL1Q01085 375 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 SFSWAPQ12872 951 aaKnown RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 PSMD5Q16401 504 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 MEP1AQ16819 746 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 SDHAF4Q5VUM1 108 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 LCN8Q6JVE9 175 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 SPRED1Q7Z699 444 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 AFAP1L2Q8N4X5 818 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 BIRC7Q96CA5 298 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 NANOGQ9H9S0 305 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 HHLA1C9JL84 531 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 AZIN1O14977 448 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 MTSS1O43312 755 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 HAPLN1P10915 354 aaPredicted RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 PRKACGP22612 351 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 PIGAP37287 484 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 PHEXP78562 749 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 DNASE1L3Q13609 305 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 NOL9Q5SY16 702 aaKnown RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 KIAA0930Q6ICG6 404 aaPredicted RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 R3HCC1LQ7Z5L2 792 aaKnown RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 STK32CQ86UX6 486 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 CLYBLQ8N0X4 340 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 OR13C4Q8NGS5 318 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 PPTC7Q8NI37 304 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 KCTD13Q8WZ19 329 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 GFM2Q969S9 779 aaKnown RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 FCRL2Q96LA5 508 aaPredicted RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 CYP2S1Q96SQ9 504 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 VAT1Q99536 393 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 MPHOSPH6Q99547 160 aaKnown RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 ING2Q9H160 280 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 NTN4Q9HB63 628 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 TBCCD1Q9NVR7 557 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 GALPQ9UBC7 116 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 TRIM17Q9Y577 477 aa13.4□□□□□ -0.26
CCDC13-201ENST00000310232 FNDC1Q4ZHG4 1894 aaPredicted RBP13.4□□□□□ -0.26
CCDC13-201ENST00000310232 TMEM247A6NEH6 219 aa13.4□□□□□ -0.27
CCDC13-201ENST00000310232 PTGES3LE9PB15 166 aa13.4□□□□□ -0.27
CCDC13-201ENST00000310232 PARNO95453 639 aaKnown RBP13.4□□□□□ -0.27
CCDC13-201ENST00000310232 S1PR4O95977 384 aa13.4□□□□□ -0.27
CCDC13-201ENST00000310232 CD4P01730 458 aa13.4□□□□□ -0.27
CCDC13-201ENST00000310232 TGFBR1P36897 503 aa13.4□□□□□ -0.27
CCDC13-201ENST00000310232 EIF2B2P49770 351 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms