RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 FAM110CQ1W6H9 321 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 ANXA8L1Q5VT79 327 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 BHLHB9Q6PI77 547 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 R3HCC1LQ7Z5L2 792 aaKnown RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TAC4Q86UU9 113 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 SMYD1Q8NB12 490 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 KLHL23Q8NBE8 558 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 VANGL1Q8TAA9 524 aaPredicted RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TRIM8Q9BZR9 551 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 SEC24AO95486 1093 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 NR1H2P55055 460 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 MANFP55145 182 aaKnown RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 FAM46CQ5VWP2 391 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 LRP10Q7Z4F1 713 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 ANKRD23Q86SG2 305 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 OR2T12Q8NG77 320 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 SNX27Q96L92 541 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 RCOR3Q9P2K3 495 aaPredicted RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 FFAR2O15552 330 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TRBC1P01850 177 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 HTR1BP28222 390 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 VPS26BQ4G0F5 336 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 KLHL12Q53G59 568 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 ADGRD1Q6QNK2 874 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 SFRP1Q8N474 314 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 RAD51AP1Q96B01 352 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 BCAS3Q9H6U6 928 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 NMUR1Q9HB89 426 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 CACNG4Q9UBN1 327 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 NOCTQ9UK39 431 aaKnown RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 STXBP5LQ9Y2K9 1186 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3DA0A087WVF3 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3IA0A087WXS9 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3EA0A087X179 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3KA0A087X1G2 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3FA6NER0 549 aaPredicted RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3LB9A6J9 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 PDE9AO76083 593 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 KLHL18O94889 574 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3HP0C7X1 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 SH3PXD2AQ5TCZ1 1133 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3GQ6DHY5 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3CQ6IPX1 549 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TRIM40Q6P9F5 258 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 SLC24A5Q71RS6 500 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 TBC1D3Q8IZP1 549 aaPredicted RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 RBM15BQ8NDT2 890 aaKnown RBP18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 PSMA8Q8TAA3 256 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 CLEC4CQ8WTT0 213 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 Q96MT0 163 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 S100A13Q99584 98 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 ZNF510Q9Y2H8 683 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 ZNF780BQ9Y6R6 833 aa18.53■□□□□ 0.56
UBXN2A-201ENST00000309033 ADH1CP00326 375 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 EQTNQ9NQ60 294 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 ERGIC3Q9Y282 383 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 CARNS1A5YM72 827 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 LRIG2O94898 1065 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 POLR2JP52435 117 aaKnown RBP18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 MZT2AQ6P582 158 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 FAM220AQ7Z4H9 259 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 SIX5Q8N196 739 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 FAM13CQ8NE31 585 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 MAML3Q96JK9 1138 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 CLEC4MQ9H2X3 399 aaPredicted RBP18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 EFR3BQ9Y2G0 817 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 NR2E1Q9Y466 385 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 MYO5BQ9ULV0 1848 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 SIN3BO75182 1162 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 PPM1AP35813 382 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 CPTPQ5TA50 214 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 MFSD5Q6N075 450 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 OR7D4Q8NG98 312 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 PCDHA2Q9Y5H9 948 aa18.52■□□□□ 0.56
UBXN2A-201ENST00000309033 VSTM1Q6UX27 236 aa18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 DEPDC4Q8N2C3 294 aa18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 NKD2Q969F2 451 aaPredicted RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 TTYH3Q9C0H2 523 aa18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 MAP10Q9P2G4 905 aa18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 AJAP1Q9UKB5 411 aaPredicted RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 FCF1Q9Y324 198 aaKnown RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 PCDHGC4Q9Y5F7 938 aa18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 AP3D1O14617 1153 aa18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 PRMT5O14744 637 aaPredicted RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 DHX15O43143 795 aaKnown RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 GET4Q7L5D6 327 aaPredicted RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 CLP1Q92989 425 aaKnown RBP18.52■□□□□ 0.55
UBXN2A-201ENST00000309033 TRAFD1O14545 582 aaPredicted RBP18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 STX11O75558 287 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 SELPP16109 830 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 RHOQP17081 205 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 CCNCP24863 283 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 PTGIRP43119 386 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 RPL5P46777 297 aaKnown RBP18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 MED22Q15528 200 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 AAGABQ6PD74 315 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 C12orf50Q8NA57 414 aaPredicted RBP18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 ZHX1-C8orf76Q96EF9 292 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 S100A14Q9HCY8 104 aa18.51■□□□□ 0.55
UBXN2A-201ENST00000309033 CDH22Q9UJ99 828 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms