RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PYCR3Q53H96 274 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 MARK2Q7KZI7 788 aaKnown RBP11.74□□□□□ -0.53
SMIM4-201ENST00000307106 NELFBQ8WX92 580 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 PNPLA2Q96AD5 504 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 C9orf72Q96LT7 481 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 TBC1D10AQ9BXI6 508 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 EPB41L1Q9H4G0 881 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
SMIM4-201ENST00000307106 ENTPD4Q9Y227 616 aa11.74□□□□□ -0.53
SMIM4-201ENST00000307106 BICDL2A1A5D9 508 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 ANKUB1A6NFN9 424 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 FOXN3O00409 490 aaPredicted RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 TRAFD1O14545 582 aaPredicted RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 SPAG6O75602 509 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 HEXIM1O94992 359 aaKnown RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 SPTBP11277 2137 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 TEAD1P28347 426 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 GPR1P46091 355 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 SEPHS1P49903 392 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 RPS18P62269 152 aaKnown RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 LRP8Q14114 963 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 ELOAQ14241 798 aaKnown RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 GBP6Q6ZN66 633 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 STRADAQ7RTN6 431 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 HSD11B1LQ7Z5J1 315 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 HPS6Q86YV9 775 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 GALNT13Q8IUC8 556 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 MCEMP1Q8IX19 187 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 UMODL1-AS1Q8N2C9 162 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 PYROXD2Q8N2H3 581 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 RBMXL3Q8N7X1 1067 aaKnown RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 MSANTD4Q8NCY6 345 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 FNIP1Q8TF40 1166 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 RXFP2Q8WXD0 754 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 RUFY1Q96T51 708 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 CATSPERBQ9H7T0 1116 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 ASF1BQ9NVP2 202 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 CNOT8Q9UFF9 292 aaKnown RBP11.73□□□□□ -0.53
SMIM4-201ENST00000307106 PHTF1Q9UMS5 762 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 CTNND2Q9UQB3 1225 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 TMEM98Q9Y2Y6 226 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
SMIM4-201ENST00000307106 NUP210LQ5VU65 1888 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 WASH4PA8MWX3 477 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 PRAMEF11O60813 436 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 PALMO75781 387 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 C9P02748 559 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 FGF5P12034 268 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 PON1P27169 355 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 VIPR1P32241 457 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 HDAC4P56524 1084 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 STX17P56962 302 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 BPIFB4P59827 614 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 IL10RAQ13651 578 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 IYDQ6PHW0 289 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 Q6ZVL8 140 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 SYVN1Q86TM6 617 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 SLC9B2Q86UD5 537 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 TRIM74Q86UV6 250 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 PPP1R3BQ86XI6 285 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 RHOT1Q8IXI2 618 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
SMIM4-201ENST00000307106 LZTR1Q8N653 840 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 FDCSPQ8NFU4 85 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 RANBP9Q96S59 729 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 CINPQ9BW66 212 aaPredicted RBP11.72□□□□□ -0.53
SMIM4-201ENST00000307106 GPR87Q9BY21 358 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 TBC1D29Q9UFV1 150 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 DNAJC12Q9UKB3 198 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 G3BP2Q9UN86 482 aaKnown RBP11.72□□□□□ -0.53
SMIM4-201ENST00000307106 MYO7BQ6PIF6 2116 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 AKAP9Q99996 3911 aa11.72□□□□□ -0.53
SMIM4-201ENST00000307106 PSMD11O00231 422 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 TOX3O15405 576 aaPredicted RBP11.71□□□□□ -0.53
SMIM4-201ENST00000307106 CREB3O43889 395 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 CEACAM4O75871 244 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 SOD1P00441 154 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 CYP11B1P15538 503 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 LHCGRP22888 699 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 PTPN4P29074 926 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 PTGIRP43119 386 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 PTPN9P43378 593 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 SCNN1BP51168 640 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 ITGA1P56199 1179 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 RPS15P62841 145 aaKnown RBP11.71□□□□□ -0.53
SMIM4-201ENST00000307106 DPTQ07507 201 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 ZXDCQ2QGD7 858 aaPredicted RBP11.71□□□□□ -0.53
SMIM4-201ENST00000307106 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMIM4-201ENST00000307106 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.53
SMIM4-201ENST00000307106 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 FAM71AQ8IYT1 594 aa11.71□□□□□ -0.53
SMIM4-201ENST00000307106 IQCKQ8N0W5 287 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms