RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PHYKPLQ8IUZ5 450 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 HID1Q8IV36 788 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PELI3Q8N2H9 469 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TTC30BQ8N4P2 665 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TRAM1L1Q8N609 369 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 OR52K1Q8NGK4 314 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 BRSK1Q8TDC3 778 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SAP25Q8TEE9 199 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 HIC2Q96JB3 615 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TBATAQ96M53 351 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TEX101Q9BY14 249 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DDX47Q9H0S4 455 aaKnown RBP10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ASIC3Q9UHC3 531 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ARL5AQ9Y689 179 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PIEZO1Q92508 2521 aa10.94□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GLYATL1P3A0A0U1RQE8 302 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PRSS38A1L453 326 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TNFRSF10CO14798 259 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 AQP9O43315 295 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 BUD23O43709 281 aaKnown RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SH3BP5O60239 455 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SUN1O94901 812 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SOD1P00441 154 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TUBB4AP04350 444 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CD59P13987 128 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TPSB2P20231 275 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CSRP1P21291 193 aaKnown RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DGKAP23743 735 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 NOVA1P51513 510 aaKnown RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 HK3P52790 923 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CDK16Q00536 496 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 BNIP3Q12983 259 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 POU6F1Q14863 301 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ELOCQ15369 112 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SHBQ15464 509 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TPSAB1Q15661 275 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ALG11Q2TAA5 492 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PRRT3Q5FWE3 981 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DENND5AQ6IQ26 1287 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FAM151BQ6UXP7 276 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CREG2Q8IUH2 290 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 KLHL7Q8IXQ5 586 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 RBFAQ8N0V3 343 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FSTL5Q8N475 847 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GPR26Q8NDV2 337 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ZNF548Q8NEK5 533 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DEFB124Q8NES8 71 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 OR4K2Q8NGD2 314 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GDAP1Q8TB36 358 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 RHBDD1Q8TEB9 315 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ZNF592Q92610 1267 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TSACCQ96A04 125 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 EID2BQ96D98 161 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PDXPQ96GD0 296 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 AGAP2Q99490 1192 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CDC6Q99741 560 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DUSP23Q9BVJ7 150 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LGR4Q9BXB1 951 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SUDS3Q9H7L9 328 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CYP4F12Q9HCS2 524 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 EVA1BQ9NVM1 165 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DLL3Q9NYJ7 618 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 IL17CQ9P0M4 197 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FTSJ1Q9UET6 329 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 APPL1Q9UKG1 709 aa10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ARHGEF17Q96PE2 2063 aaPredicted RBP10.93□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 HEATR9A2RTY3 570 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DCDC2BA2VCK2 349 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TMEM202A6NGA9 273 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PCNX2A6NKB5 2137 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FADS2P1A8MWK0 482 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FFAR2O15552 330 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SLC25A14O95258 325 aaPredicted RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ANXA6P08133 673 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TPH1P17752 444 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TMPRSS15P98073 1019 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CKAP4Q07065 602 aaKnown RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GTF2H3Q13889 308 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PSAPL1Q6NUJ1 521 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SYDE1Q6ZW31 735 aaPredicted RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 DGLUCYQ7Z3D6 616 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PIP4P1Q86T03 277 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 TRIM74Q86UV6 250 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GKN2Q86XP6 184 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GALNT13Q8IUC8 556 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 EID2Q8N6I1 236 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 PPHLN1Q8NEY8 458 aaKnown RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 STYXQ8WUJ0 223 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 SCG3Q8WXD2 468 aaKnown RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 OR1E3Q8WZA6 343 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 GLYATL1Q969I3 302 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 VPS35Q96QK1 796 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 LRRC61Q9BV99 259 aa10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 FRMD8Q9BZ67 464 aaPredicted RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 ZCCHC2Q9C0B9 1178 aaKnown RBP10.92□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CARS2Q9HA77 564 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms