RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SH3GLB1Q9Y371 365 aa13.25□□□□□ -0.29
DDX54-201ENST00000306014 MARF1Q9Y4F3 1742 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 MED26O95402 600 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 TOP3AQ13472 1001 aaPredicted RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 CEACAM7Q14002 265 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 PAFAH1B3Q15102 231 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 TSNQ15631 228 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 SPATA19Q7Z5L4 167 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 TRIM69Q86WT6 500 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 FBRSL1Q9HCM7 1045 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 BHMG1C9JSJ3 638 aaPredicted RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 PGK1P00558 417 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 CHI3L1P36222 383 aaPredicted RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 CXCR3P49682 368 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 ARHGAP1Q07960 439 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 HSPA14Q0VDF9 509 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 TRAP1Q12931 704 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 RSBN1Q5VWQ0 802 aaPredicted RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 THAP5Q7Z6K1 395 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 AADATQ8N5Z0 425 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 PSMG2Q969U7 264 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 HSPBAP1Q96EW2 488 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 CHID1Q9BWS9 393 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 AKTIPQ9H8T0 292 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 DUSP12Q9UNI6 340 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 LRATO95237 230 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 OTCP00480 354 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 GOT2P00505 430 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 HLA-DQB2P05538 268 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 THRBP10828 461 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 AKR1A1P14550 325 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 EPB42P16452 691 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 SMPD1P17405 629 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 ARMC12Q5T9G4 340 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 SYT12Q8IV01 421 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 ERI1Q8IV48 349 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 TP53INP2Q8IXH6 220 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 HMCESQ96FZ2 354 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 NPY6RQ99463 290 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 ZBED2Q9BTP6 218 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
DDX54-201ENST00000306014 SUCOQ9UBS9 1254 aaKnown RBP13.24□□□□□ -0.29
DDX54-201ENST00000306014 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 CAPN14A8MX76 684 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 ASNA1O43681 348 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 IL1BP01584 269 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 DGKAP23743 735 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 SIM2Q14190 667 aaPredicted RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 OR52E8Q6IFG1 317 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 RETSATQ6NUM9 610 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 GALNT5Q7Z7M9 940 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 ADAMTSL2Q86TH1 951 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 MED8Q96G25 268 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 PLK2Q9NYY3 685 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 TTC24A2A3L6 582 aaPredicted RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 TMEM88BA6NKF7 163 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 BTBD19C9JJ37 291 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 FAM72CH0Y354 149 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 RNASEH2AO75792 299 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 MFN2O95140 757 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 CLIC3O95833 236 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 CAPGP40121 348 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 FAM72AQ5TYM5 149 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 FAM72DQ6L9T8 149 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 NAPRTQ6XQN6 538 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 SLCO6A1Q86UG4 719 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 FAM72BQ86X60 149 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 MAPK15Q8TD08 544 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 STYXQ8WUJ0 223 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 COX4I2Q96KJ9 171 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 EPB41L1Q9H4G0 881 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 GIMAP2Q9UG22 337 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 PCDHB9Q9Y5E1 797 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 H7C4K7 107 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 DBTP11182 482 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 PKMP14618 531 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 CTPS1P17812 591 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 ATP5C1P36542 298 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 RPL26P61254 145 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 PPP1R3AQ16821 1122 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 CIR1Q86X95 450 aaPredicted RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 TXNRD2Q9NNW7 524 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 CACNA2D2Q9NY47 1150 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 SLC7A4O43246 635 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 OR4F21O95013 312 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 EPN2O95208 641 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 IMPDH1P20839 514 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 KRR1Q13601 381 aaKnown RBP13.23□□□□□ -0.29
DDX54-201ENST00000306014 IKBKEQ14164 716 aa13.23□□□□□ -0.29
DDX54-201ENST00000306014 PAGE2BQ5JRK9 111 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms