RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 NDUFS3O75489 264 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 RFC2P35250 354 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 ILF2Q12905 390 aaKnown RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 TUBA3CQ13748 450 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 SV2CQ496J9 727 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 LRCH3Q96II8 777 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 NEURL2Q9BR09 285 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 PDZD7Q9H5P4 517 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 CATSPERBQ9H7T0 1116 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 EXOSC4Q9NPD3 245 aaKnown RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 TIMM13Q9Y5L4 95 aaPredicted RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 GLP2RO95838 553 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 ANGPTL1O95841 491 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 HSMCR30P0CW71 290 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 PABPC1P11940 636 aaKnown RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 ARSFP54793 590 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 SKIV2LQ15477 1246 aaKnown RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
TRIM35-201ENST00000305364 DHRS4L2Q6PKH6 230 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 CLEC14AQ86T13 490 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 PROSER1Q86XN7 944 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 SIX5Q8N196 739 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 PNPLA1Q8N8W4 532 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 MCOLN3Q8TDD5 553 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 BIRC7Q96CA5 298 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 FEM1AQ9BSK4 669 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 ELP3Q9H9T3 547 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 PIGVQ9NUD9 493 aa13□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF99A8MXY4 864 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MED26O95402 600 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 PTPRAP18433 802 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 PLA2G16P53816 162 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MTPNP58546 118 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 INCA1Q0VD86 236 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 KCNJ8Q15842 424 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ATP6AP1Q15904 470 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 SMURF2Q9HAU4 748 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 AGPAT4Q9NRZ5 378 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 AGRPO00253 132 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TRIM24O15164 1050 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 NPR3P17342 541 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ACAP2Q15057 778 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ADHFE1Q8IWW8 467 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ABI1Q8IZP0 508 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ATG16L2Q8NAA4 619 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 RMDN1Q96DB5 314 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MLPHQ9BV36 600 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 BBS2Q9BXC9 721 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ROGDIQ9GZN7 287 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TOR3AQ9H497 397 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MEAF6Q9HAF1 191 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 GDAP2Q9NXN4 497 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MAGEL2Q9UJ55 1249 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 PLSCR1O15162 318 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 AQP9O43315 295 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 LRIG2O94898 1065 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 POLR2JP52435 117 aaKnown RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MAXP61244 160 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 VBP1P61758 197 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 CD300CQ08708 224 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 SLC13A2Q13183 592 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 RBM48Q5RL73 367 aaKnown RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TMEM236Q5W0B7 351 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MAMDC4Q6UXC1 1216 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 HORMAD1Q86X24 394 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 CDYL2Q8N8U2 506 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 B3GALNT2Q8NCR0 500 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 SETD9Q8NE22 299 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 EMID1Q96A84 441 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ULK4Q96C45 1275 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 MYRFLQ96LU7 910 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 KCNA7Q96RP8 456 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 HBEGFQ99075 208 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 PCYT2Q99447 389 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 EGFL8Q99944 293 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 HGH1Q9BTY7 390 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 GLOD4Q9HC38 313 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TRIM39Q9HCM9 518 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 GMIPQ9P107 970 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 FAM72CH0Y354 149 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 UBXN8O00124 270 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TSPAN3O60637 253 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 VPS4BO75351 444 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 KATNA1O75449 491 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 PFKMP08237 780 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 IMPDH1P20839 514 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 TCEA1P23193 301 aaKnown RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 IL12AP29459 219 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 AKT1P31749 480 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 SERPINH1P50454 418 aaKnown RBP12.99□□□□□ -0.33
TRIM35-201ENST00000305364 ARPC4P59998 168 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 GRB7Q14451 532 aa12.99□□□□□ -0.33
TRIM35-201ENST00000305364 DMC1Q14565 340 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms