RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SMIM14Q96QK8 99 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 ERVK-6Q9BXR3 956 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 NUF2Q9BZD4 464 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 TM6SF2Q9BZW4 377 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 EVLQ9UI08 416 aaPredicted RBP19.34■□□□□ 0.69
HOXC4-201ENST00000303406 CLEC4EQ9ULY5 219 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 SLC30A1Q9Y6M5 507 aa19.34■□□□□ 0.69
HOXC4-201ENST00000303406 A0A1W2PQ67 120 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 CAPN8A6NHC0 703 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 E9PBE3 544 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 KLHL41O60662 606 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 COX4I1P13073 169 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 SERPINA4P29622 427 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 KCNC1P48547 511 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 UNC50Q53HI1 259 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 SWT1Q5T5J6 900 aaKnown RBP19.33■□□□□ 0.68
HOXC4-201ENST00000303406 WLSQ5T9L3 541 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 LYSMD3Q7Z3D4 306 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 NET1Q7Z628 596 aaPredicted RBP19.33■□□□□ 0.68
HOXC4-201ENST00000303406 CAMK1DQ8IU85 385 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 SCUBE1Q8IWY4 988 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 AGR3Q8TD06 166 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 MOCOSQ96EN8 888 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 RTKNQ9BST9 563 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 P2RY12Q9H244 342 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 MEAF6Q9HAF1 191 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 CYP4F12Q9HCS2 524 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 MAN1C1Q9NR34 630 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 GTSE1Q9NYZ3 720 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 NOP53Q9NZM5 478 aaKnown RBP19.33■□□□□ 0.68
HOXC4-201ENST00000303406 TBC1D14Q9P2M4 693 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 APPL1Q9UKG1 709 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 PPIL1Q9Y3C6 166 aa19.33■□□□□ 0.68
HOXC4-201ENST00000303406 SYCE1LA8MT33 242 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 SDHDO14521 159 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 DCXO43602 365 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 XYLBO75191 536 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 RB1P06400 928 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 THRAP10827 490 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 SRCP12931 536 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 MXRA7P84157 204 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 OR4D1Q15615 310 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 CDKN3Q16667 212 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 CTSL3PQ5NE16 218 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 PAQR3Q6TCH7 311 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 PHTF2Q8N3S3 785 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 PCDH20Q8N6Y1 951 aaKnown RBP19.32■□□□□ 0.68
HOXC4-201ENST00000303406 KIAA1958Q8N8K9 716 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 CEP70Q8NHQ1 597 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 OTUB2Q96DC9 234 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 TTC1Q99614 292 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 CPEB1Q9BZB8 566 aaKnown RBP19.32■□□□□ 0.68
HOXC4-201ENST00000303406 WDR55Q9H6Y2 383 aaPredicted RBP19.32■□□□□ 0.68
HOXC4-201ENST00000303406 DCLRE1BQ9H816 532 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 ZFYVE1Q9HBF4 777 aa19.32■□□□□ 0.68
HOXC4-201ENST00000303406 TRMT6Q9UJA5 497 aaKnown RBP19.32■□□□□ 0.68
HOXC4-201ENST00000303406 H3BMM5 538 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 STX16-NPEPL1H3BU86 382 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 STX16O14662 325 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 KLK8O60259 260 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 MTHFD2P13995 350 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 EZRP15311 586 aaKnown RBP19.31■□□□□ 0.68
HOXC4-201ENST00000303406 GM2AP17900 193 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 PIK3R1P27986 724 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 EPHA3P29320 983 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 TEAD2Q15562 447 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 TRMT5Q32P41 509 aaKnown RBP19.31■□□□□ 0.68
HOXC4-201ENST00000303406 C6orf163Q5TEZ5 329 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 PLPP6Q8IY26 295 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 PTGR2Q8N8N7 351 aaPredicted RBP19.31■□□□□ 0.68
HOXC4-201ENST00000303406 FBXO27Q8NI29 283 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 RP9Q8TA86 221 aaKnown RBP19.31■□□□□ 0.68
HOXC4-201ENST00000303406 BHMTQ93088 406 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 ECHDC3Q96DC8 303 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 PHF21BQ96EK2 531 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 PDLIM5Q96HC4 596 aaKnown RBP19.31■□□□□ 0.68
HOXC4-201ENST00000303406 GPR21Q99679 349 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 C1QTNF3Q9BXJ4 246 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 EBF2Q9HAK2 575 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 BPIFA1Q9NP55 256 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 TDP1Q9NUW8 608 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 HCFC1R1Q9NWW0 138 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 PLK2Q9NYY3 685 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 MARK1Q9P0L2 795 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 SLC25A13Q9UJS0 675 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 SCN8AQ9UQD0 1980 aa19.31■□□□□ 0.68
HOXC4-201ENST00000303406 TRBV5-4A0A0C4DH59 114 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 RGSL1A5PLK6 1076 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 PRMT5O14744 637 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CIB2O75838 187 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 RHOP08100 348 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 FGF4P08620 206 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 HNRNPLP14866 589 aaKnown RBP eCLIP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 HLA-FP30511 346 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CDKN1CP49918 316 aaPredicted RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 CCNG1P51959 295 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 BTKQ06187 659 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ZRSR2Q15696 482 aaKnown RBP19.3■□□□□ 0.68
HOXC4-201ENST00000303406 ZNF77Q15935 545 aa19.3■□□□□ 0.68
HOXC4-201ENST00000303406 PDCD2Q16342 344 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms