RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GPR33Q49SQ1 333 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 ZNF805Q5CZA5 627 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 LYPLAL1Q5VWZ2 237 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PARM1Q6UWI2 310 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 C6orf89Q6UWU4 347 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 ZYG11AQ6WRX3 759 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 NUDT18Q6ZVK8 323 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 MTSS1LQ765P7 747 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 TSPAN33Q86UF1 283 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 HEXDCQ8WVB3 486 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 PBXIP1Q96AQ6 731 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 LRCH3Q96II8 777 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 NECTIN4Q96NY8 510 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 GPR78Q96P69 363 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 TRMT61BQ9BVS5 477 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 IL26Q9NPH9 171 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 GTSE1Q9NYZ3 720 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 DKK3Q9UBP4 350 aa15.65■□□□□ 0.1
HERPUD1-201ENST00000300302 EDDM13A0A1B0GTR0 161 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 TSPAN11A1L157 253 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 GOLGA8CPA6NN73 597 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 TK2O00142 265 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 TRIM13O60858 407 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 SNNO75324 88 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 RHOBTB1O94844 696 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 PYGLP06737 847 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 RBP1P09455 135 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF30P17039 623 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 BPIP17213 487 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 XPAP23025 273 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 GDI1P31150 447 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 OCRLQ01968 901 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ASPHQ12797 758 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 DLG1Q12959 904 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 NFATC2Q13469 925 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ARHGEF7Q14155 803 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ACAP2Q15057 778 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ZCCHC23Q6ZST2 131 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 CRLF3Q8IUI8 442 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF398Q8TD17 642 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 FGF14Q92915 247 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 POMKQ9H5K3 350 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ASB8Q9H765 288 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 SYTL2Q9HCH5 934 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 NPHS2Q9NP85 383 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 IGSF5Q9NSI5 407 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 XPR1Q9UBH6 696 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 KIAA1549LQ6ZVL6 1849 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ATXN2Q99700 1313 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 DOCK8Q8NF50 2099 aa15.64■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF106Q9H2Y7 1883 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 VPS26AO75436 327 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 WISP3O95389 354 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 ESR1P03372 595 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PRNPP04156 253 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PKMP14618 531 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 OPRD1P41143 372 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 SLC1A6P48664 564 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 MESP2Q0VG99 397 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 OVGP1Q12889 678 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 ITGA9Q13797 1035 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 HNRNPA1L2Q32P51 320 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 ITPRIPL2Q3MIP1 535 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 YTHDF3Q7Z739 585 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PIM3Q86V86 326 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PHTF2Q8N3S3 785 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 SPATA6LQ8N4H0 392 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 TMEM151AQ8N4L1 468 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PPP4R1Q8TF05 950 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 MTG2Q9H4K7 406 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 OXSMQ9NWU1 459 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 B4GALT6Q9UBX8 382 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PCDHB1Q9Y5F3 818 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PRRC2BQ5JSZ5 2229 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 TMEM265A0A087WTH1 108 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 UPK3BL1B0FP48 263 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 UPK3BL2E5RIL1 263 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 CTSLP07711 333 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF7P17097 686 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 CD9P21926 228 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 LHCGRP22888 699 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 VIPR1P32241 457 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PTSQ03393 145 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 LIPMQ5VYY2 423 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 SERPINA13PQ6UXR4 307 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 TTC7BQ86TV6 843 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 ZNF366Q8N895 744 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 OR8D1Q8WZ84 308 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 THOC1Q96FV9 657 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 MSLNLQ96KJ4 702 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 BIRC8Q96P09 236 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PLEKHG4BQ96PX9 1271 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 PKD2L2Q9NZM6 624 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 CRLS1Q9UJA2 301 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 USH1CQ9Y6N9 552 aa15.63■□□□□ 0.09
HERPUD1-201ENST00000300302 SCN8AQ9UQD0 1980 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 TMEM114B3SHH9 223 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 TARM1B6A8C7 271 aa15.62■□□□□ 0.09
HERPUD1-201ENST00000300302 GAPDHSO14556 408 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms