RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MRPS6P82932 125 aaKnown RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 CDKL1Q00532 357 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 GRB7Q14451 532 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 PAGE2BQ5JRK9 111 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 SMYD5Q6GMV2 418 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 FAM45BPQ6NSW5 357 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 KCTD8Q6ZWB6 473 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.26□□□□□ -0.29
CASC4-201ENST00000299957 ARRDC4Q8NCT1 418 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 FAM45AQ8TCE6 357 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 DHRS4Q9BTZ2 278 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 MTMR10Q9NXD2 777 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 RAB26Q9ULW5 256 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 TRPV2Q9Y5S1 764 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 DDX60LQ5H9U9 1706 aaKnown RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 PNMA8CA0A1B0GUJ8 204 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 PRORSD1PA6NEY8 169 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 MATN3O15232 486 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 FAM20BO75063 409 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 CAPN1P07384 714 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 HLA-DPA1P20036 260 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 PLD1Q13393 1074 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 SYTL3Q4VX76 610 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.291e-8■■■□□ 14.6
CASC4-201ENST00000299957 SMIM14Q96QK8 99 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 GPR22Q99680 433 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 FEM1AQ9BSK4 669 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 CACNA2D2Q9NY47 1150 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 MARCH4Q9P2E8 410 aaPredicted RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 RCOR3Q9P2K3 495 aaPredicted RBP13.26□□□□□ -0.29
CASC4-201ENST00000299957 OPTCQ9UBM4 332 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 ADGRE2Q9UHX3 823 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 FKBPLQ9UIM3 349 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 ADAMTSL3P82987 1691 aa13.26□□□□□ -0.29
CASC4-201ENST00000299957 A0A1B0GTW7 788 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 RSL1D1O76021 490 aaKnown RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 MYO1DO94832 1006 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 ARSDP51689 593 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 ZNF534Q76KX8 674 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 SFRP1Q8N474 314 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 RDH11Q8TC12 318 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 MZB1Q8WU39 189 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 CNTN3Q9P232 1028 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 UPK3BL1B0FP48 263 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 UPK3BL2E5RIL1 263 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 SDHDO14521 159 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 ALOX12P18054 663 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 S100A5P33763 92 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 MTHFRP42898 656 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 RPS9P46781 194 aaKnown RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 SERPINB10P48595 397 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 HK2P52789 917 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 IST1P53990 364 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 STARD3Q14849 445 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 EGFLAMQ63HQ2 1017 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 FBXL19Q6PCT2 694 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 KBTBD7Q8WVZ9 684 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 HTRA1Q92743 480 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 PYCR2Q96C36 320 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 FEM1CQ96JP0 617 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 EPS8L2Q9H6S3 715 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 GKN1Q9NS71 199 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 CDC14AQ9UNH5 594 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 ULK1O75385 1050 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 ALDH2P05091 517 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 HAPLN1P10915 354 aaPredicted RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 S100A3P33764 101 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 CES4AQ5XG92 561 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 SLC2A7Q6PXP3 512 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 MAVSQ7Z434 540 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 DDX53Q86TM3 631 aaKnown RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 GANCQ8TET4 914 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 KLHL32Q96NJ5 620 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 ADGRE3Q9BY15 652 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 C1orf21Q9H246 121 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
CASC4-201ENST00000299957 EVLQ9UI08 416 aaPredicted RBP13.25□□□□□ -0.29
CASC4-201ENST00000299957 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 G3V2L1 256 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 FCGR1AP12314 374 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 CCNA2P20248 432 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ITGALP20701 1170 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 AXLP30530 894 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 CD68P34810 354 aaPredicted RBP13.24□□□□□ -0.29
CASC4-201ENST00000299957 UFM1P61960 85 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 SULT2A1Q06520 285 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 IKBKEQ14164 716 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ALFQ53S48 1182 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 EID3Q8N140 333 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 OR52E6Q96RD3 313 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 OLFM1Q99784 485 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 C16orf70Q9BSU1 422 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ATG10Q9H0Y0 220 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms