RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 GLT6D1Q7Z4J2 308 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 HIPK3Q9H422 1215 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TMEM248Q9NWD8 314 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 NSMCE4AQ9NXX6 385 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 CIDEBQ9UHD4 219 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 POMPQ9Y244 141 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TSC2P49815 1807 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 H0Y626 953 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 K7ERQ8 282 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 MAGEC1O60732 1142 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 FKBP6O75344 327 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 CRCPO75575 148 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TRMUO75648 421 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TFAP2AP05549 437 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 LTA4HP09960 611 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 MBL2P11226 248 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 ZNF135P52742 658 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 GNA12Q03113 381 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 GPR17Q13304 367 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 CCNIQ14094 377 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 ANKDD1AQ495B1 522 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 LRRC73Q5JTD7 316 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 SMYD5Q6GMV2 418 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 KIAA0930Q6ICG6 404 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 CYP2R1Q6VVX0 501 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 CUZD1Q86UP6 607 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 PTGR2Q8N8N7 351 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TRPC4APQ8TEL6 797 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 GIPC3Q8TF64 312 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 NSMCE3Q96MG7 304 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 GPR78Q96P69 363 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 XIRP2A4UGR9 3374 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 SYN3O14994 580 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 IL1BP01584 269 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 MAGEA12P43365 314 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 ENTPD1P49961 510 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 RAP1GDS1P52306 607 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 THOP1P52888 689 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 ZNF177Q13360 481 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TMEM259Q4ZIN3 620 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 TXNDC8Q6A555 127 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 KRT80Q6KB66 452 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 MSANTD2Q6P1R3 559 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 LPCAT2Q7L5N7 544 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 PTERQ96BW5 349 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 SPATA17Q96L03 361 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 MRPL57Q9BQC6 102 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 PAIP1Q9H074 479 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 IGSF5Q9NSI5 407 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 GMPR2Q9P2T1 348 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 GALPQ9UBC7 116 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 UBA2Q9UBT2 640 aaPredicted RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 MID2Q9UJV3 735 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 VPS28Q9UK41 221 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 ATP11BQ9Y2G3 1177 aa10.08□□□□□ -0.8
FOXN4-201ENST00000299162 COPG1Q9Y678 874 aaKnown RBP10.08□□□□□ -0.8
FOXN4-201ENST00000299162 SMIM31A0A1B0GVY4 71 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 MOXD2PA6NHM9 499 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 F8W8V4 182 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 AP3B1O00203 1094 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 LDB2O43679 373 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 SRP72O76094 671 aaKnown RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 C1RP00736 705 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 XRCC1P18887 633 aaPredicted RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 CHRM3P20309 590 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ATP5F1P24539 256 aaPredicted RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 MZF1P28698 734 aaPredicted RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 SLC11A2P49281 568 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 NDST2P52849 883 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 STXBP5Q5T5C0 1151 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 RAVER1Q8IY67 606 aaKnown RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 SPPL2BQ8TCT7 592 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ZNF296Q8WUU4 475 aaPredicted RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 LZICQ8WZA0 190 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 MAELQ96JY0 434 aaKnown RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 PIF1Q9H611 641 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 MID1IP1Q9NPA3 183 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 SCUBE2Q9NQ36 999 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 SELENONQ9NZV5 590 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 PCDHB9Q9Y5E1 797 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ACSL4O60488 711 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 NDUFS3O75489 264 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 IPO13O94829 963 aaKnown RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 S1PR4O95977 384 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ALPIP09923 528 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ATXN1LP0C7T5 689 aaKnown RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 CES1P23141 567 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 HOXC13P31276 330 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 SLC5A2P31639 672 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 POU4F1Q01851 419 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ARTNQ5T4W7 220 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 PAQR3Q6TCH7 311 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms