RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 VGLL3A8MV65 326 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 STX11O75558 287 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 SNHG28P0DPA3 235 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 PKMP14618 531 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 TCEA1P23193 301 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 DSC2Q02487 901 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 RAPSNQ13702 412 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 IL17AQ16552 155 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 TEX44Q53QW1 395 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 WDR93Q6P2C0 686 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 BBS12Q6ZW61 710 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 P4HA3Q7Z4N8 544 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 TAC4Q86UU9 113 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 ULK2Q8IYT8 1036 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 RDH11Q8TC12 318 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 BRSK1Q8TDC3 778 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 BPIFB1Q8TDL5 484 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 HNRNPLLQ8WVV9 542 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 CENPIQ92674 756 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 RBM18Q96H35 190 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 FUBP3Q96I24 572 aaKnown RBP eCLIP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 MARK4Q96L34 752 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 OLFM1Q99784 485 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 SPATA9Q9BWV2 254 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 MYBPHLA2RUH7 354 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 DCXO43602 365 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 B3GALT2O43825 422 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 FKBP6O75344 327 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 PTPN4P29074 926 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 S100GP29377 79 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 ARRB1P49407 418 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 ECT2LQ008S8 904 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 GHRHRQ02643 423 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 ATXN7L2Q5T6C5 722 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 PMF1Q6P1K2 205 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 CERS6Q6ZMG9 384 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 GRASPQ7Z6J2 395 aaPredicted RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 JAZF1Q86VZ6 243 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 GKN2Q86XP6 184 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 ZDHHC13Q8IUH4 622 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC43A3Q8NBI5 491 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 POF1BQ8WVV4 589 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 DNASE1L2Q92874 299 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 CAVIN3Q969G5 261 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 PCBD2Q9H0N5 130 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 WDR26Q9H7D7 661 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 CARS2Q9HA77 564 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 DDX18Q9NVP1 670 aaKnown RBP6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 L1RE1Q9UN81 338 aa6.9□□□□□ -1.31
GAPVD1-202ENST00000297933 TRIM43BA6NCK2 446 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 PEX12O00623 359 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 RFXANKO14593 260 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 SNUPNO95149 360 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 CHRNA1P02708 482 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 PIM1P11309 404 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 NQO1P15559 274 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ACADSP16219 412 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 TSHRP16473 764 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 CSTF2P33240 577 aaKnown RBP eCLIP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 NAGLUP54802 743 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 OC90Q02509 493 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC13A2Q13183 592 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 NAE1Q13564 534 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 GRM2Q14416 872 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ADRM1Q16186 407 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ARSIQ5FYB1 569 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 SH3D19Q5HYK7 790 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 CPTPQ5TA50 214 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 TMC3Q7Z5M5 1100 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 MMAAQ8IVH4 418 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 AADATQ8N5Z0 425 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 TEX47Q8TBZ9 253 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 PHF10Q8WUB8 498 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ZNF75CPQ92670 426 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 RIT1Q92963 219 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 CSPG4P5Q96PW8 444 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 FAM124BQ9H5Z6 455 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 FANCFQ9NPI8 374 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 CIDEBQ9UHD4 219 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 FBXW2Q9UKT8 454 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ZNF490Q9ULM2 529 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 POLR3HQ9Y535 204 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 FCHO1O14526 889 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 IFNGP01579 166 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ME2P23368 584 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC6A2P23975 617 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 CCKBRP32239 447 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 ACTR3P61158 418 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 KRR1Q13601 381 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 GRB14Q14449 540 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 MBLAC2Q68D91 279 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 LMX1AQ8TE12 382 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC9A6Q92581 669 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 VPS35Q96QK1 796 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 RAB11FIP5Q9BXF6 653 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 RHOBTB2Q9BYZ6 727 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 KLHL25Q9H0H3 589 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 AZIN1O14977 448 aa6.89□□□□□ -1.31
GAPVD1-202ENST00000297933 MAGEB3O15480 346 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms